PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021671768.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 623aa MW: 70021.4 Da PI: 5.6738

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021671768.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36	1.3e-11	424	471	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++h +Er+RR++++++f L++++P+ + K++ ++iL +++eY+++L+ XP_021671768.1 424 ANHILVERKRREKLKERFMILKSIVPSiN------KVDEVSILDETIEYLQELE 471 57999********************77......**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 623 aa Download sequence
MAQEIVPENL NKRLALAVRN IQWSYAIFWS ISARQPGVLD WGDGYYNGDI KTRKTVQSIE 60 LNADQLGLQR SEQLRELYKS LSAGEASPQA RRPSVALSPE DLTDTEWYYL VCMSFVFDIG 120 QGLPGRTLAI AQPIWLYNAH YADSKAFSRS LLAKSASIQT VVCFPFLRGV VELGVTELIM 180 EDPSLIQHVK TSFLEIPYPI VATKTNTRSD KELAGTAFDQ EILEHKLIPV AGCDELDAVS 240 LNDSSNNQPE EDSFMFEGIN EGASQVQSWQ LMDDGFSNCV HNSLNSSDYI SQSTVDPVKN 300 APVPNNETVN NHCLQDVQDC NHTKLTALDL RRDDFHYHSV LSSILKTSHP LILGPHFQNC 360 NKVSSFVSWK KVHYQKSKGA PSQKLLKKIL FEVPWMNVSA LPDSSGDNSN KIGVWRPEAD 420 DISANHILVE RKRREKLKER FMILKSIVPS INKVDEVSIL DETIEYLQEL ERRVEELESC 480 RELTELDART RRKPQDVIER TSDNYGSNKI GNNKKPLVNK RKVCNIDERE AEMDYGISKD 540 ASDDNITVIM NDKDVLIEIK CPWREGLLLE IMDAASHLLL DSHSVQSSAI DGILSLTIKS 600 KKGPTAASAR AIKQALQRVA CKC

Sequence ? help Back to Top

Protein Sequence Length: 623 aa Download sequence

MAQEIVPENL NKRLALAVRN IQWSYAIFWS ISARQPGVLD WGDGYYNGDI KTRKTVQSIE  60
LNADQLGLQR SEQLRELYKS LSAGEASPQA RRPSVALSPE DLTDTEWYYL VCMSFVFDIG  120
QGLPGRTLAI AQPIWLYNAH YADSKAFSRS LLAKSASIQT VVCFPFLRGV VELGVTELIM  180
EDPSLIQHVK TSFLEIPYPI VATKTNTRSD KELAGTAFDQ EILEHKLIPV AGCDELDAVS  240
LNDSSNNQPE EDSFMFEGIN EGASQVQSWQ LMDDGFSNCV HNSLNSSDYI SQSTVDPVKN  300
APVPNNETVN NHCLQDVQDC NHTKLTALDL RRDDFHYHSV LSSILKTSHP LILGPHFQNC  360
NKVSSFVSWK KVHYQKSKGA PSQKLLKKIL FEVPWMNVSA LPDSSGDNSN KIGVWRPEAD  420
DISANHILVE RKRREKLKER FMILKSIVPS INKVDEVSIL DETIEYLQEL ERRVEELESC  480
RELTELDART RRKPQDVIER TSDNYGSNKI GNNKKPLVNK RKVCNIDERE AEMDYGISKD  540
ASDDNITVIM NDKDVLIEIK CPWREGLLLE IMDAASHLLL DSHSVQSSAI DGILSLTIKS  600
KKGPTAASAR AIKQALQRVA CKC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	430	435	ERKRRE
2	431	436	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	0.0	bHLH family protein