PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021671188.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 342aa MW: 38523.3 Da PI: 6.8665

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021671188.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.9	3.7e-13	136	187	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+ XP_021671188.1 136 QRMTHIAVERNRRKQMNEYLSVLRSLMPES---YVQRGDQASIIGGAINFVKELE 187 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MALEAVVYQQ DLFGHSSKEL YNLLGGSWSY DDFSLEKEDY DKACSFNSFL ENQSENFLHG 60 DWKYSSSPPP SVFSHFSEMR QINTSPDAEN AKNGLTTAAS ATDHLLDHSP SSTMPSARAK 120 RRRSRSRKNK EEIENQRMTH IAVERNRRKQ MNEYLSVLRS LMPESYVQRG DQASIIGGAI 180 NFVKELEQRL QLLGGKKETK EKSNGGGEAT SLPFSEFFTF PQYSIMTSST RSENSVAAVN 240 ETMSATQSSA SIADIEVTMV ESHANLKIRL KRRPKQLLKV VSGLHTMRLT ILHLNVTTLH 300 QIVLYSISVK VEDDCKLSSV DEIATAVNEM LGRIQEEYSM MN

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MALEAVVYQQ DLFGHSSKEL YNLLGGSWSY DDFSLEKEDY DKACSFNSFL ENQSENFLHG  60
DWKYSSSPPP SVFSHFSEMR QINTSPDAEN AKNGLTTAAS ATDHLLDHSP SSTMPSARAK  120
RRRSRSRKNK EEIENQRMTH IAVERNRRKQ MNEYLSVLRS LMPESYVQRG DQASIIGGAI  180
NFVKELEQRL QLLGGKKETK EKSNGGGEAT SLPFSEFFTF PQYSIMTSST RSENSVAAVN  240
ETMSATQSSA SIADIEVTMV ESHANLKIRL KRRPKQLLKV VSGLHTMRLT ILHLNVTTLH  300
QIVLYSISVK VEDDCKLSSV DEIATAVNEM LGRIQEEYSM MN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	137	148	RMTHIAVERNRR
2	270	276	LKRRPKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	5e-82	bHLH family protein