PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021670813.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 305aa    MW: 34289.8 Da    PI: 7.9588
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021670813.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.91.1e-131055146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     +g+W +eEde l++ vk++G ++W++I ++  + Rt+k+c++rw +
   XP_021670813.1 10 KGPWKAEEDEVLINHVKKYGARDWSSIRAKGLLQRTGKSCRLRWVN 55
                     79*************************887668***********87 PP
2Myb_DNA-binding42.61.4e-1366105344
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                      +++ eE+   +++ +q+G++ W++Ia +++ gRt++++k++w
   XP_021670813.1  66 KFSVEEERVVIELQAQFGNK-WAKIATYLP-GRTDNDVKNFW 105
                      799*****************.*********.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MEGKRDEIRK GPWKAEEDEV LINHVKKYGA RDWSSIRAKG LLQRTGKSCR LRWVNKLRPN  60
LKNGCKFSVE EERVVIELQA QFGNKWAKIA TYLPGRTDND VKNFWSSRQK RLARILQTSA  120
TPSSSSSSNS KPRKVKKEVP AFHDVPTLQA PMFSFSMKEE SSTKAQSCSS SYIETPEPAS  180
IVPLPFHSDL VVKNELPSYD ANLAQVETQT QIPFPQISQH QPELTFSPES QELLARLEDP  240
FLFNVFGAVD APELGAQLSL GPPLFDPFSS CMNGAREVRS PTTRGTFFDD FPSDVFDNIE  300
PLPSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.13e-95MYB family protein