PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021670139.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 259aa    MW: 29399.2 Da    PI: 4.7194
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021670139.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.31.1e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+ Ed+ l d+v++ G g W+++ar  g++R++k+c++rw++yl
   XP_021670139.1 14 RGAWTALEDKMLMDYVAMRGEGKWSSVARNTGLKRCGKSCRLRWLNYL 61
                     89********************************************97 PP
2Myb_DNA-binding55.61.2e-1767111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++ +E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ 
   XP_021670139.1  67 RGNFSDDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111
                      89********************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MGRSPGCSKE GFNRGAWTAL EDKMLMDYVA MRGEGKWSSV ARNTGLKRCG KSCRLRWLNY  60
LRPGIKRGNF SDDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLAKKAQELQ  120
FTLPKLEKKQ PYLAGPSATQ QQDVQLVNVA IGPILETEKS SSLLCEAEFL KDFSVEELCQ  180
ILDSDYLTKP SDVNVNDVRE EEIDGVNKSE TAEFPMKFEE NWDGNASCVE NDYISRLLSF  240
LDSDVEWPVM ASITNICSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.13e-60MYB family protein