PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021669999.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NAC

Protein Properties

Length: 424aa MW: 48243.5 Da PI: 6.694

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021669999.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.8	6.2e-51	15	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_021669999.1 15 VPPGFRFHPTEEELLHYYLRKKVAYEKIDL-DVIRDVDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKII 108 69**************************.9***********964444222455******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s + + +gl+ktLvfykgrap+g+k+dW+mheyrl XP_021669999.1 109 YS-GFKRIGLRKTLVFYKGRAPHGQKSDWIMHEYRL 143 .9999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MPEDMNFSIN GHSRVPPGFR FHPTEEELLH YYLRKKVAYE KIDLDVIRDV DLNKLEPWDI 60 QEKCKIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKIIYS GFKRIGLRKT 120 LVFYKGRAPH GQKSDWIMHE YRLDDSFHDS TVSNPIEEAI PEEGWVVCRV FRKKNYQKTL 180 ECPKGSSSSM DSKTQILSSG NDGVLDQILL YMGRTCKMEN ESFSHMNLSN NSNNNSVRFL 240 SSNNTGIGEG LHEGFMHLPR LDSPTLPPVT INSPPFDEDN NFRSCYPSYD EMLIENNKPS 300 SPTTTNNNNH HHNQRYHLPP NGFDMTSIHE NNKSGLNDWA ILDRLVASQL NGQVETSKQL 360 SCFSDSNGSF GLPPDDDMQL SQLHGHSNRS SQGNSQVYSS ENDIWTFTKS SSPSSSDPLC 420 HLSV

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MPEDMNFSIN GHSRVPPGFR FHPTEEELLH YYLRKKVAYE KIDLDVIRDV DLNKLEPWDI  60
QEKCKIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKIIYS GFKRIGLRKT  120
LVFYKGRAPH GQKSDWIMHE YRLDDSFHDS TVSNPIEEAI PEEGWVVCRV FRKKNYQKTL  180
ECPKGSSSSM DSKTQILSSG NDGVLDQILL YMGRTCKMEN ESFSHMNLSN NSNNNSVRFL  240
SSNNTGIGEG LHEGFMHLPR LDSPTLPPVT INSPPFDEDN NFRSCYPSYD EMLIENNKPS  300
SPTTTNNNNH HHNQRYHLPP NGFDMTSIHE NNKSGLNDWA ILDRLVASQL NGQVETSKQL  360
SCFSDSNGSF GLPPDDDMQL SQLHGHSNRS SQGNSQVYSS ENDIWTFTKS SSPSSSDPLC  420
HLSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-104	NAC family protein