PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021669713.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 443aa MW: 48901.5 Da PI: 4.9627 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.3 | 1.5e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ed++l+ +++++Ggg W+t +++ g+ R++k+c++rw +yl XP_021669713.1 14 RGAWTADEDQKLIAYIQEHGGGGWRTMPQKAGLQRCGKSCRLRWANYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 56.9 | 4.9e-18 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++teE++ ++++++ lG++ W++Iar+++ +Rt++++k++w+++l XP_021669713.1 67 RGEFSTEEEKMIIQLHATLGNR-WSAIARHLP-KRTDNEIKNYWNTHL 112 899*******************.*********.************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 443 aa Download sequence |
MGRTPCCNEA GLKRGAWTAD EDQKLIAYIQ EHGGGGWRTM PQKAGLQRCG KSCRLRWANY 60 LRPDIKRGEF STEEEKMIIQ LHATLGNRWS AIARHLPKRT DNEIKNYWNT HLKKRLVDRG 120 IDPVTHRLIT SSSMDNPCNM VEERSDSEIR PIQRSISTSA KLINQVSAKF AQMQRKEMTT 180 TVSTPPTCLD AIKAVLLNST KDTITYSGSS GGGGGDNGDD SDVEMIPSRP ISRSSRILNK 240 MATKLAPSKS LDLLKNRLSV PSKQSMASRS VSDTSTTGGT YNNIESPISI SDLLESMPTS 300 SSACESSELT GNLSMGEDQV NEAFAVLHQA MELETTATPE SPMYTTNELE ELLGNYGGDQ 360 DGATITNDVT KSKACDSQVA TSMEPATDFI EKFTNMPFGC RPNEYSTTKD NFYGEEESNG 420 GALEVNMNYW NEDFDWLITD CNN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G07690.1 | 1e-76 | MYB family protein |