PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021669355.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GeBP

Protein Properties

Length: 401aa MW: 44725.2 Da PI: 4.3962

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021669355.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	121.5	4.3e-38	131	225	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 lfqrlw++eDeiv+LqG++d+++++g s++ d+ fy+++k++++++++k+qlveK+rrLKkK+++ +k++sgk++sf+++hdq +fe+s+kiW XP_021669355.1 131 LFQRLWTDEDEIVVLQGFLDYTTQRG-SSHYDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLNKISSGKDFSFKSPHDQASFEISRKIW 224 79**********************.8899************************************************************** PP DUF573 97 g 97 XP_021669355.1 225 S 225 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MASEQDDTVF GHDLDDDDDD EESSQSQDDD DDLENDDVIV GNDDVLADEE DEVDLNSVSP 60 STSSPATVPV AVPSSSVVTV AVPNGGDPPS ASVESAPDSK RQRVETMRVI HQREEKKPQP 120 QPQQMDESRR LFQRLWTDED EIVVLQGFLD YTTQRGSSHY DTALFYDQIK SKLQLDFNKN 180 QLVEKLRRLK KKYRNVLNKI SSGKDFSFKS PHDQASFEIS RKIWSSTGKI GVEDGNLDDE 240 EGNPNPPNFN DAEVKIEDHK STPRSRKRSR SRSCAAAPSG VKVDDKRVSS EANNDSNNTN 300 NVINNNNQNV SVLIEETVRS CLSPLFKELL SNFMAVGPCT GRGIGGLAMN AMPLSFGGGE 360 LMVDEKWRKQ QILELEVYSK RLELVQDQIK AQLEELRSMG G

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MASEQDDTVF GHDLDDDDDD EESSQSQDDD DDLENDDVIV GNDDVLADEE DEVDLNSVSP  60
STSSPATVPV AVPSSSVVTV AVPNGGDPPS ASVESAPDSK RQRVETMRVI HQREEKKPQP  120
QPQQMDESRR LFQRLWTDED EIVVLQGFLD YTTQRGSSHY DTALFYDQIK SKLQLDFNKN  180
QLVEKLRRLK KKYRNVLNKI SSGKDFSFKS PHDQASFEIS RKIWSSTGKI GVEDGNLDDE  240
EGNPNPPNFN DAEVKIEDHK STPRSRKRSR SRSCAAAPSG VKVDDKRVSS EANNDSNNTN  300
NVINNNNQNV SVLIEETVRS CLSPLFKELL SNFMAVGPCT GRGIGGLAMN AMPLSFGGGE  360
LMVDEKWRKQ QILELEVYSK RLELVQDQIK AQLEELRSMG G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	267	272	KRSRSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	2e-55	GeBP family protein