PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021668856.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NAC

Protein Properties

Length: 584aa MW: 65302.4 Da PI: 4.9275

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021668856.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.6	1.7e-51	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp GfrF+Ptdeelv++yL+ k++g++ ++ +vi+e+d++k+ePwdLp + +k++++ew+fF++ d+ky++g+r nrat++gyWkatgkd++++ XP_021668856.1 9 LPLGFRFRPTDEELVKFYLRLKINGNDKDV-RVIRELDVCKWEPWDLPdlSIIKTNDQEWFFFCPLDRKYPNGHRLNRATEKGYWKATGKDRKIK 102 699**********************999.99**********96448888999*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++l+g+kktLvfy+grap+g++t+Wv+heyr+ XP_021668856.1 103 S-GNNLIGMKKTLVFYTGRAPRGTRTHWVIHEYRA 136 .999***************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 584 aa Download sequence
MAVLSLSSLP LGFRFRPTDE ELVKFYLRLK INGNDKDVRV IRELDVCKWE PWDLPDLSII 60 KTNDQEWFFF CPLDRKYPNG HRLNRATEKG YWKATGKDRK IKSGNNLIGM KKTLVFYTGR 120 APRGTRTHWV IHEYRATEED LDGTKPGQSP FVICRLFKKQ DDSVEGLNSE EPEATLSSPT 180 AAQSSPEVAE SELALPQASP VNGSPFNILP SNECFNACQS GDQTVDAATL EEDTQLEEDL 240 NWFVQPPEPL DDKLFSPLHA QVQAEVGCPY YSIANDWSNC TSGVQSHNGT NEIDAAYVTN 300 FLNDILQQPS EYGCEESDSI KNIALDECPE SYTGLVTRTL LEEELQGPVW PEEDIDIKPP 360 LHVETIPEDS RSLIFNHNIV EQHSLHNELY GSQSFASSSA ADQLTSFKKI RSHTNQIGSS 420 ESVGTGIRIR ARNSQNLPNA GSTAMQGLAS RRIRLQCKLQ VQPLHFGGKL EECKLEHDVL 480 EELKTREKDT AVGDGGCSTK DEHELQTLSP SESNKISEEL MPNVGPNKRL RSHASLLKKL 540 QSMFSKASST GPPIWSIALF GVVFIVILLL ILVSKWHCLI FETA

Sequence ? help Back to Top

Protein Sequence Length: 584 aa Download sequence

MAVLSLSSLP LGFRFRPTDE ELVKFYLRLK INGNDKDVRV IRELDVCKWE PWDLPDLSII  60
KTNDQEWFFF CPLDRKYPNG HRLNRATEKG YWKATGKDRK IKSGNNLIGM KKTLVFYTGR  120
APRGTRTHWV IHEYRATEED LDGTKPGQSP FVICRLFKKQ DDSVEGLNSE EPEATLSSPT  180
AAQSSPEVAE SELALPQASP VNGSPFNILP SNECFNACQS GDQTVDAATL EEDTQLEEDL  240
NWFVQPPEPL DDKLFSPLHA QVQAEVGCPY YSIANDWSNC TSGVQSHNGT NEIDAAYVTN  300
FLNDILQQPS EYGCEESDSI KNIALDECPE SYTGLVTRTL LEEELQGPVW PEEDIDIKPP  360
LHVETIPEDS RSLIFNHNIV EQHSLHNELY GSQSFASSSA ADQLTSFKKI RSHTNQIGSS  420
ESVGTGIRIR ARNSQNLPNA GSTAMQGLAS RRIRLQCKLQ VQPLHFGGKL EECKLEHDVL  480
EELKTREKDT AVGDGGCSTK DEHELQTLSP SESNKISEEL MPNVGPNKRL RSHASLLKKL  540
QSMFSKASST GPPIWSIALF GVVFIVILLL ILVSKWHCLI FETA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24590.2	1e-106	NAC family protein