PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021668756.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 200aa MW: 23075.5 Da PI: 10.241

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021668756.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	86.6	1.4e-27	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + r+vtfskRrngilKKA+ELS+LCdaev++++fs tgk y ++s XP_021668756.1 9 KRIENPTSRHVTFSKRRNGILKKAFELSILCDAEVCLLVFSATGKAYQFAS 59 79**********************************************986 PP
2	K-box	69.9	7.9e-24	84	169	12	97
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +++e +++e++ L++ i + ++ ++hl Ged+++L +keL+qLe+qL++++++iRskK ++++e+i+ l++k ++lqe n++L+k+ XP_021668756.1 84 RTMEFWRNEIEELERTIATTETGLKHLCGEDISTLGMKELKQLERQLKTGVERIRSKKRRIITEHINLLKRKHRALQEGNTRLQKR 169 56899******************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MGRGKVDLKR IENPTSRHVT FSKRRNGILK KAFELSILCD AEVCLLVFSA TGKAYQFASH 60 DTDRTIARYR REVGLLGSND QYCRTMEFWR NEIEELERTI ATTETGLKHL CGEDISTLGM 120 KELKQLERQL KTGVERIRSK KRRIITEHIN LLKRKHRALQ EGNTRLQKRE LRDASIGTGI 180 LDPNPCNAFQ QRVVDDGILH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22950.1	2e-44	MIKC_MADS family protein