PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021668694.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 233aa MW: 25494.2 Da PI: 10.5814 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 244.8 | 5.7e-75 | 35 | 233 | 102 | 301 |
GAGA_bind 102 lsgtksidslqqlse....pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekk 192 ++t+si+s ++ + +++ + ++++e ++++ +++ +a+++k + k++++ + k+ k k++kk+s+k++ + ++ +++ +ek+ XP_021668694.1 35 APKTSSIHSQGTQIDsqpgLPVAPICSVAPKTEPAKNNNSGTKPAKARKQKPSLKGSNQISSKTLKPKQPKKTSSKKNGH-SM----PEAIREKR 124 45555555544433323334456666667778888888877888888888888888888888888888888844443322.22....34567999 PP GAGA_bind 193 sidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkd 287 ++++ ++ +++D s++P P CsCtG++r+CYkWG+GGWqS+CCt++iS yPLP+s++r+gaR+agrKmS+ga+ klL kLaaeG+dls+pvDLk+ XP_021668694.1 125 NLNVDIDRMNYDLSGVPSPFCSCTGMPRVCYKWGAGGWQSSCCTISISEYPLPMSSTRPGARMAGRKMSNGAYVKLLLKLAAEGHDLSHPVDLKE 219 *********************************************************************************************** PP GAGA_bind 288 hWAkHGtnkfvtir 301 hWA+HGtnkfv i+ XP_021668694.1 220 HWARHGTNKFVIIK 233 ***********998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MMGTYSNRSH ITPETSTGAS VPHFSWFYSR SFYSAPKTSS IHSQGTQIDS QPGLPVAPIC 60 SVAPKTEPAK NNNSGTKPAK ARKQKPSLKG SNQISSKTLK PKQPKKTSSK KNGHSMPEAI 120 REKRNLNVDI DRMNYDLSGV PSPFCSCTGM PRVCYKWGAG GWQSSCCTIS ISEYPLPMSS 180 TRPGARMAGR KMSNGAYVKL LLKLAAEGHD LSHPVDLKEH WARHGTNKFV IIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35550.3 | 2e-69 | BBR-BPC family protein |