PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021668496.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 585aa    MW: 65302.3 Da    PI: 5.5508
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021668496.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS253.11e-771995802374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvsel.ykalppsetseknsseelaalkl....fsevsPil 91 
                      el+++ A+ vs+++  + + lL +   l+s +g+++qRl+ y+ +AL++r+ r++ ++ ++ l  ++ ++ n  e+++a +      ++  P+ 
  XP_021668496.1 199 AELIIASADKVSNHQYDCPSILLDQCDSLSSATGNAVQRLVYYISKALRERIDRETGRItFQDL--EKLRSFNINEKIMASTPtilaCHQQVPFS 291
                     5789999***********************************************4444404444..33444456666666543455689999*** PP

            GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg.........skeeleetgerLakfAeelgvpf 176
                     +++h++  qaIle v++ +++H+iD++i  G+QW  L+qaLas +   +  ++iT+vg  +++         +k+ +e tg+rL++fA++++ pf
  XP_021668496.1 292 QVAHFAGIQAILEQVSETKKIHVIDLGIRIGVQWTVLMQALASLSkFHTELFKITAVGTTKKKlmedtvgttKKKLMEDTGKRLRSFAQTINFPF 386
                     ******************************************9984566799*******998899******99999******************* PP

            GRAS 177 efnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
                     +f++++++++ ++e + ++++ +E+++  +   l +l     +l+++  + +k++++l+P ++vv e e ++ s+ F++rf+eal ++sa+fd+l
  XP_021668496.1 387 SFKTVIVSDMLEFEEDLFELDADETVVFYCDCLLTSLI----PLPDRLASPMKVIRNLNPCIMVVNEPENNTASHAFVNRFIEALFHCSAFFDCL 477
                     ********************************999998....77777788********************************************* PP

            GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdr 365
                     ea +  ++ +ri +E + +g++i+n++a+eg er+ ++ +l  Wr+ + + G+ +v+ s +   qa+l+ +k++ ++   v  + + l++gWk+ 
  XP_021668496.1 478 EACM-GDDPNRIIIESFHFGEAIKNILAAEGVERKVQNAKLDVWRSFFARHGMYKVEPSASSLFQANLVAKKFAcGNSSAVLMDGKDLIIGWKGT 571
                     **97.7889*****************************************************************999999*************** PP

            GRAS 366 pLvsvSaWr 374
                     pL s+SaW+
  XP_021668496.1 572 PLHSLSAWK 580
                     ********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 585 aa     Download sequence    
MEFTEESNFS GAQDNLQSTN RSSAEGNGRK GTERYEAEEG QSREGTIFTL DQLQELQQQP  60
FLDHRFLNDQ RFDISSPSLQ SCLEEIAKLV EILSKEIHQE VAQSKKNKQD SFPSTSLKLL  120
RICGEGLKLS SERAINPTNT PSTKVASQGL STEEIVRIAG KSYFKFFTQG IDATSILNTS  180
VDASLSGLSN EDSKSVELAE LIIASADKVS NHQYDCPSIL LDQCDSLSSA TGNAVQRLVY  240
YISKALRERI DRETGRITFQ DLEKLRSFNI NEKIMASTPT ILACHQQVPF SQVAHFAGIQ  300
AILEQVSETK KIHVIDLGIR IGVQWTVLMQ ALASLSKFHT ELFKITAVGT TKKKLMEDTV  360
GTTKKKLMED TGKRLRSFAQ TINFPFSFKT VIVSDMLEFE EDLFELDADE TVVFYCDCLL  420
TSLIPLPDRL ASPMKVIRNL NPCIMVVNEP ENNTASHAFV NRFIEALFHC SAFFDCLEAC  480
MGDDPNRIII ESFHFGEAIK NILAAEGVER KVQNAKLDVW RSFFARHGMY KVEPSASSLF  540
QANLVAKKFA CGNSSAVLMD GKDLIIGWKG TPLHSLSAWK FISQD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.16e-39GRAS family protein