PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021668376.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 622aa MW: 69640 Da PI: 5.4724

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021668376.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	4.9e-13	426	469	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 Er+RR+++N++f L++++P++ K +K +iL +++eY+++++ XP_021668376.1 426 LLERKRREKLNERFMILKSIVPSS-----NKADKLSILDETIEYLQQME 469 68*******************7.....59*************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
MAQEKVLEKN LKKQLALAVR SIQWSYAIFW SISATQPGVL EWGDGYYNGD IKTRKTIQSI 60 ELNADQLGLQ RSEQLRELYE SLSAGEGSPQ ARRPSVALSP EDLTDTEWYY LVCMSFVFNI 120 GQGLPGRTLA TGQPIWLCNA YYADSKIFSR SLLAKSASIQ TVVCFPFLRG VVELGVTEMV 180 LEDPSLIQHV KTSFLDIKCP TVATNTSTRS DKELAGAAFD QEVLEVKSIP VVACEELDAV 240 SPNDSSNNQP EEDSFMVEGI NGGASQVQSW QLMDDDCVHY SLNSSDCISQ TIVDPVKVAP 300 LTNNEKANLQ DVQDCNHTKL TALDLRSDDF HYQSVLSSLL KTSHPLILGS HCQNGNKVSS 360 FVSWKKVGLV HYQISKGAPA QKLLKKILFE VPRMHVSGLP ESPEDNSNRI GVWRPEADDI 420 GANNVLLERK RREKLNERFM ILKSIVPSSN KADKLSILDE TIEYLQQMER RVEELESCRD 480 STELEARTRR KRQDAIERTS DNYGSYKIRN NKKPLVNKRK ACNIDETEPG MDYDISKDTS 540 TDNIIVCMND KDVLIEIKCP WREGLLLEII DAATQLHLDS HSVQSSTIDG ILSLTIKSKQ 600 KGLTAWSARA IKQVLERVAS KC

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

MAQEKVLEKN LKKQLALAVR SIQWSYAIFW SISATQPGVL EWGDGYYNGD IKTRKTIQSI  60
ELNADQLGLQ RSEQLRELYE SLSAGEGSPQ ARRPSVALSP EDLTDTEWYY LVCMSFVFNI  120
GQGLPGRTLA TGQPIWLCNA YYADSKIFSR SLLAKSASIQ TVVCFPFLRG VVELGVTEMV  180
LEDPSLIQHV KTSFLDIKCP TVATNTSTRS DKELAGAAFD QEVLEVKSIP VVACEELDAV  240
SPNDSSNNQP EEDSFMVEGI NGGASQVQSW QLMDDDCVHY SLNSSDCISQ TIVDPVKVAP  300
LTNNEKANLQ DVQDCNHTKL TALDLRSDDF HYQSVLSSLL KTSHPLILGS HCQNGNKVSS  360
FVSWKKVGLV HYQISKGAPA QKLLKKILFE VPRMHVSGLP ESPEDNSNRI GVWRPEADDI  420
GANNVLLERK RREKLNERFM ILKSIVPSSN KADKLSILDE TIEYLQQMER RVEELESCRD  480
STELEARTRR KRQDAIERTS DNYGSYKIRN NKKPLVNKRK ACNIDETEPG MDYDISKDTS  540
TDNIIVCMND KDVLIEIKCP WREGLLLEII DAATQLHLDS HSVQSSTIDG ILSLTIKSKQ  600
KGLTAWSARA IKQVLERVAS KC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	428	433	ERKRRE
2	429	434	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	0.0	bHLH family protein