PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021668033.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 321aa MW: 36151.5 Da PI: 7.1512

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021668033.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	135	2.9e-42	15	114	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC+++Cv+apyfp +qp+kfa vhk+FGasnv+kll++l+ +reda++sl+yeAe r+rdPvyG+vg+i+ lq++l+ql++el XP_021668033.1 15 PCAACKLLRRKCTQECVFAPYFPPDQPQKFASVHKVFGASNVSKLLNDLNAAQREDAVNSLAYEAEERLRDPVYGCVGLISILQKRLKQLQSELY 109 7*********************************************************************************************9 PP DUF260 96 llkee 100 ++k+e XP_021668033.1 110 HAKKE 114 99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MVLYRKEKMS SSNSPCAACK LLRRKCTQEC VFAPYFPPDQ PQKFASVHKV FGASNVSKLL 60 NDLNAAQRED AVNSLAYEAE ERLRDPVYGC VGLISILQKR LKQLQSELYH AKKELAEYIG 120 PSAMLPILQP STFMPQQHMG NPSASNVMPH NMLPMMGIPT GPADGGQLMI SEHPQQSHQH 180 PTHQQQQQQQ FFEAQQLAAA VAVRDQQEMF RTYDQQQHQD QSQHQQELVR FNSGFDATGS 240 VTATGYNQLS AASAMSPSLA LATYDNPYQI QPQVEHHHHH HHHQLQPQLF LQPQQQQPLQ 300 QTQQQQQRSG SEEGRSVGPS C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	3e-80	LBD family protein