PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021666600.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 419aa MW: 44127.7 Da PI: 9.1917

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021666600.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	111.8	9.5e-35	110	212	2	102
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa 95 a ++++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+ WLl+ a++ai+++tgt++ ++ ++ ++ + a ++ +++ ++++ XP_021666600.1 110 ASRRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIQATGTGTVPSIAVsVGGTLKIPATTNDTNNSLTETT 204 67999***********************************************************8888855542222222222222333333333 PP TCP 96 .kskksqk 102 k+k++++ XP_021666600.1 205 kKRKRPSN 212 23333332 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MDPNDEGATS DVSTSVGEVN MKKSNNNISD NNNGLSKIST IDETEAFQLI SFKEEPIDSD 60 PDPPSDSDHR TQSRAPKQPP PSPPTAIGVV PMSMQMQIPM SIPLPMPVTA SRRSSTKDRH 120 TKVEGRGRRI RIPATCAARI FQLTRELGHK SDGETVRWLL EHAEQAIIQA TGTGTVPSIA 180 VSVGGTLKIP ATTNDTNNSL TETTKKRKRP SNSEFCDISE ATVSVSQSSG LAPVTPTTPF 240 AATATPQGLV PMWAVGSAGM MVPANAFWMI PQAATLSGTP AFVAAAGLVG QPTQTQQPQI 300 WALSPSITSV FNVAAARPIS TFVGATNTIN NQSSIGSVVN IPSGVEVRAA SAVVSSTSVG 360 AKEAKKSTMA PSASSSGGSV SSGGKAQLLK DFSLEIYDKQ ELQLMGRPAN WHLQLQRTR

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MDPNDEGATS DVSTSVGEVN MKKSNNNISD NNNGLSKIST IDETEAFQLI SFKEEPIDSD  60
PDPPSDSDHR TQSRAPKQPP PSPPTAIGVV PMSMQMQIPM SIPLPMPVTA SRRSSTKDRH  120
TKVEGRGRRI RIPATCAARI FQLTRELGHK SDGETVRWLL EHAEQAIIQA TGTGTVPSIA  180
VSVGGTLKIP ATTNDTNNSL TETTKKRKRP SNSEFCDISE ATVSVSQSSG LAPVTPTTPF  240
AATATPQGLV PMWAVGSAGM MVPANAFWMI PQAATLSGTP AFVAAAGLVG QPTQTQQPQI  300
WALSPSITSV FNVAAARPIS TFVGATNTIN NQSSIGSVVN IPSGVEVRAA SAVVSSTSVG  360
AKEAKKSTMA PSASSSGGSV SSGGKAQLLK DFSLEIYDKQ ELQLMGRPAN WHLQLQRTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	1e-63	TCP family protein