PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021665987.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 260aa MW: 29575 Da PI: 7.0819 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 123.7 | 9.1e-39 | 10 | 110 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk+ rrkC+++C+lapyf +qpk f+n+hklFG+sn+lk+lk+l++ ++e+am+s++y++++r + Pv+G+ g+i +l+ q++q+++el+ XP_021665987.1 10 ACAACKYRRRKCSSKCPLAPYFLPDQPKLFQNAHKLFGVSNILKILKNLEPRQKEEAMRSIIYQSNIRDKFPVHGCWGIICQLHYQIRQAEEELH 104 7********************************************************************************************** PP DUF260 96 llkeel 101 +++++l XP_021665987.1 105 AVHSQL 110 **9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MTLKGGTSQA CAACKYRRRK CSSKCPLAPY FLPDQPKLFQ NAHKLFGVSN ILKILKNLEP 60 RQKEEAMRSI IYQSNIRDKF PVHGCWGIIC QLHYQIRQAE EELHAVHSQL DMYKQYQQHQ 120 ISSLTDDAPS QLELGMATPS NALSIFGHPT TPQPYNAVTT SPVTQQHSYS NSNNAGYSCG 180 YLDSKDHLGN SWWVQHTYAT TNNNNNNNTN PMAIQSQLVA SQPLAIQQEV VQDYDEIHPF 240 FDTIDDRQSY IDSKEAYESR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47870.1 | 7e-62 | LBD family protein |