PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021665899.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 663aa MW: 76796.1 Da PI: 5.7169

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021665899.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72	1.3e-22	60	142	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fYn YAke GF vr+s++ ++ +++e ++ ++ Cs g++++++ + r+r+etrtgC a++k +++++++w+++++eleHnH ++ XP_021665899.1 60 FYNCYAKEQGFGVRVSNTWYR-KSKERYRGKLSCSSAGFKKKSEAN-----RPRPETRTGCPAMIKFRLMENKRWRIIEVELEHNHLIS 142 9*************99997.66779**********99888.....*********************************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 663 aa Download sequence
MDEVSLNTEP IGDDEADEFE IEGDCAMTEY VGQTGTIQGE NPIPPAVGME FESYEDVYYF 60 YNCYAKEQGF GVRVSNTWYR KSKERYRGKL SCSSAGFKKK SEANRPRPET RTGCPAMIKF 120 RLMENKRWRI IEVELEHNHL ISPASGKFYK SHKLIGAGTK RTLQLDGPDE VQKIRMYRTV 180 IIDSEGNEGV DDEGQCGNLL HSNQLKLREG DAQAVQDFFC RSQLMDPNFF YVVDLNEKGY 240 MRNLFWADAR SRVAYGYFGD VVAIDTSCLK EKFEVPLVSF IGVNHHGHSM PLGCGLLAGE 300 TTETYIWLLR AWLTCMLGRP PQAVITDQCR SLQTAVLDVL PRASHCLHLS HIMQRVPENL 360 GDLFEFEAIR EALSRIVNYF LRPEEFEATW EEMVQHHGIR DHRWIQTLYE DRKRWVPAYV 420 KETFLAGLFP FQQNEIVPSI FEGYLDKHTP LKEFLDKYDQ ALQTNHQLEA LADVDSRNSS 480 LMLKSRCYFE LQLSKLYTNE ILKRFEKEVE GMYACFSTRQ VGIDGQLTTY IVKEQVEVEN 540 NRQETRDFEV MYNTSEMDIL CVCGLFNFKG YLCRHALSVL HQNALEEIPP QYILTRWRKD 600 VNRSYVLDHG SGGIDTNNPV HRYDHLYKCI VRVVEEGRKS QDRYKVTLQA LGEILNKLHL 660 LED

Sequence ? help Back to Top

Protein Sequence Length: 663 aa Download sequence

MDEVSLNTEP IGDDEADEFE IEGDCAMTEY VGQTGTIQGE NPIPPAVGME FESYEDVYYF  60
YNCYAKEQGF GVRVSNTWYR KSKERYRGKL SCSSAGFKKK SEANRPRPET RTGCPAMIKF  120
RLMENKRWRI IEVELEHNHL ISPASGKFYK SHKLIGAGTK RTLQLDGPDE VQKIRMYRTV  180
IIDSEGNEGV DDEGQCGNLL HSNQLKLREG DAQAVQDFFC RSQLMDPNFF YVVDLNEKGY  240
MRNLFWADAR SRVAYGYFGD VVAIDTSCLK EKFEVPLVSF IGVNHHGHSM PLGCGLLAGE  300
TTETYIWLLR AWLTCMLGRP PQAVITDQCR SLQTAVLDVL PRASHCLHLS HIMQRVPENL  360
GDLFEFEAIR EALSRIVNYF LRPEEFEATW EEMVQHHGIR DHRWIQTLYE DRKRWVPAYV  420
KETFLAGLFP FQQNEIVPSI FEGYLDKHTP LKEFLDKYDQ ALQTNHQLEA LADVDSRNSS  480
LMLKSRCYFE LQLSKLYTNE ILKRFEKEVE GMYACFSTRQ VGIDGQLTTY IVKEQVEVEN  540
NRQETRDFEV MYNTSEMDIL CVCGLFNFKG YLCRHALSVL HQNALEEIPP QYILTRWRKD  600
VNRSYVLDHG SGGIDTNNPV HRYDHLYKCI VRVVEEGRKS QDRYKVTLQA LGEILNKLHL  660
LED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein