PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664841.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 1061aa MW: 117344 Da PI: 6.8159

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664841.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70.9	1.6e-22	87	188	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ +++++ ++l+ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++++ XP_021664841.1 87 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfSMQPPA-QELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFI--RDEK 178 99***************************9445444.38********************************************..5688 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 ++l+++++r+ XP_021664841.1 179 QQLLLGIRRA 188 889**997 PP
2	Auxin_resp	120.5	1.3e-39	213	296	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+v+YnPras+seFv++++k+ ka++ +++s+GmRf+m+fete+s +rr++Gt++g+sd+dpvrW+nS+Wr+L+ XP_021664841.1 213 AAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVYsNQISLGMRFRMMFETEESGTRRYMGTITGISDIDPVRWKNSQWRNLQ 296 79******************************9989******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1061 aa Download sequence
MKTPAISAGV SVAATSCVTT SNPAEGGENK SINPELWQAC AGPLVSLPAA GTLVVYFPQG 60 HSEQFDKDAL LRSDLSLKSN KAQTEFFCKT LTASDTSTHG GFSVPRRAAE KIFPPLDFSM 120 QPPAQELVAR DLHDNVWTFR HIYRGQPKRH LLTTGWSLFV SGKRLFAGDS VLFIRDEKQQ 180 LLLGIRRANK QPANLSSSVL SSDSMHIGIL AAAAHAAANN SPFTVFYNPR ASPSEFVIPL 240 AKYYKAVYSN QISLGMRFRM MFETEESGTR RYMGTITGIS DIDPVRWKNS QWRNLQVGWD 300 ESTAGERRNR VSIWEIEPVT APFFICPPPF FRSKRPRQPG MPDDDSPDLD NLFKKSMPWL 360 GDDFYMKDPQ SVPGLSLLQC INMQQNPSLA NAMPPNYMQS LSGSVLQNLT GPDLSHQLGL 420 SAPQLPQPNN LQFNSQRLPL QSQQFDQLPK MQSSLNSLGS IIQSQQQLGD ITQQSKQNLV 480 TQTITSSQVQ AQILQPQTLV QNTNILQQQP SLQSHQLPRN LPQTLQQQQN QQQHIVGQNQ 540 QQSVIQTQLP DQVNQHLQMS DNQIQIQLLQ KLQQQQQSLL TQQSVLQQPS QFAQLQDPQR 600 QLLEASQSFS RSMRPNQLLE MPQTTPNSLP QSNIIQQQMT KNGNQTNAQF SHMPQQLKLQ 660 QQQPGILSEM PGHMGLPPSS GVNHFSTVGS SILTAAAGAG ISGITEELPS CSTSPSTNNC 720 ANMVHRVHQS TAIGDDMAQS AATLLSSNAL ETMSCSTNLV KDVQQKSDVK PSMNIAKNQN 780 QGFFAPQTYQ NGATAQTDYL DTSSSTTSVC VSQNDVHLQQ NNNSSSYNPH SLLLRDISQD 840 GELQANPRNN VPYGANIDGQ LGVLMNSDQV LTKSIIGLGK DLPNNLSSAG MISNCENSKD 900 PQHELSSSMV SRSFGVPDMA FNSIDSTIND SSFLNRGPWA PPPQFQRMRT YTKVYKRGAV 960 GRSIDITRYS GYDELKQDLA RRFGIEGQLE DRHRIGWKLV YVDHENDVLL VGDDPWEEFV 1020 NCVRCIKILS PQEVQQMSLD GDFGNSVHPN QACSSSDNGN A

Sequence ? help Back to Top

Protein Sequence Length: 1061 aa Download sequence

MKTPAISAGV SVAATSCVTT SNPAEGGENK SINPELWQAC AGPLVSLPAA GTLVVYFPQG  60
HSEQFDKDAL LRSDLSLKSN KAQTEFFCKT LTASDTSTHG GFSVPRRAAE KIFPPLDFSM  120
QPPAQELVAR DLHDNVWTFR HIYRGQPKRH LLTTGWSLFV SGKRLFAGDS VLFIRDEKQQ  180
LLLGIRRANK QPANLSSSVL SSDSMHIGIL AAAAHAAANN SPFTVFYNPR ASPSEFVIPL  240
AKYYKAVYSN QISLGMRFRM MFETEESGTR RYMGTITGIS DIDPVRWKNS QWRNLQVGWD  300
ESTAGERRNR VSIWEIEPVT APFFICPPPF FRSKRPRQPG MPDDDSPDLD NLFKKSMPWL  360
GDDFYMKDPQ SVPGLSLLQC INMQQNPSLA NAMPPNYMQS LSGSVLQNLT GPDLSHQLGL  420
SAPQLPQPNN LQFNSQRLPL QSQQFDQLPK MQSSLNSLGS IIQSQQQLGD ITQQSKQNLV  480
TQTITSSQVQ AQILQPQTLV QNTNILQQQP SLQSHQLPRN LPQTLQQQQN QQQHIVGQNQ  540
QQSVIQTQLP DQVNQHLQMS DNQIQIQLLQ KLQQQQQSLL TQQSVLQQPS QFAQLQDPQR  600
QLLEASQSFS RSMRPNQLLE MPQTTPNSLP QSNIIQQQMT KNGNQTNAQF SHMPQQLKLQ  660
QQQPGILSEM PGHMGLPPSS GVNHFSTVGS SILTAAAGAG ISGITEELPS CSTSPSTNNC  720
ANMVHRVHQS TAIGDDMAQS AATLLSSNAL ETMSCSTNLV KDVQQKSDVK PSMNIAKNQN  780
QGFFAPQTYQ NGATAQTDYL DTSSSTTSVC VSQNDVHLQQ NNNSSSYNPH SLLLRDISQD  840
GELQANPRNN VPYGANIDGQ LGVLMNSDQV LTKSIIGLGK DLPNNLSSAG MISNCENSKD  900
PQHELSSSMV SRSFGVPDMA FNSIDSTIND SSFLNRGPWA PPPQFQRMRT YTKVYKRGAV  960
GRSIDITRYS GYDELKQDLA RRFGIEGQLE DRHRIGWKLV YVDHENDVLL VGDDPWEEFV  1020
NCVRCIKILS PQEVQQMSLD GDFGNSVHPN QACSSSDNGN A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein