PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664840.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 1083aa MW: 119718 Da PI: 6.6732

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664840.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70.9	1.7e-22	139	240	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ +++++ ++l+ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++++ XP_021664840.1 139 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfSMQPPA-QELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFI--RDEK 230 99***************************9445444.38********************************************..5688 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 ++l+++++r+ XP_021664840.1 231 QQLLLGIRRA 240 889**997 PP
2	Auxin_resp	120.4	1.4e-39	265	348	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+v+YnPras+seFv++++k+ ka++ +++s+GmRf+m+fete+s +rr++Gt++g+sd+dpvrW+nS+Wr+L+ XP_021664840.1 265 AAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVYsNQISLGMRFRMMFETEESGTRRYMGTITGISDIDPVRWKNSQWRNLQ 348 79******************************9989******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1083 aa Download sequence
MKTPAISAGV SVAATSCVTT SNPAEGGENK SINPELWQAC AGPLVSLPAA GTLVVYFPQG 60 HSEQVAASMK KDVDAHIPNY PNLPSKLLCL LHNVTLHADP ETDEVYAQMT LQPVPSFDKD 120 ALLRSDLSLK SNKAQTEFFC KTLTASDTST HGGFSVPRRA AEKIFPPLDF SMQPPAQELV 180 ARDLHDNVWT FRHIYRGQPK RHLLTTGWSL FVSGKRLFAG DSVLFIRDEK QQLLLGIRRA 240 NKQPANLSSS VLSSDSMHIG ILAAAAHAAA NNSPFTVFYN PRASPSEFVI PLAKYYKAVY 300 SNQISLGMRF RMMFETEESG TRRYMGTITG ISDIDPVRWK NSQWRNLQVG WDESTAGERR 360 NRVSIWEIEP VTAPFFICPP PFFRSKRPRQ PGMPDDDSPD LDNLFKKSMP WLGDDFYMKD 420 PQSVPGLSLL QCINMQQNPS LANAMPPNYM QSLSGSVLQN LTGPDLSHQL GLSAPQLPQP 480 NNLQFNSQRL PLQSQQFDQL PKMQSSLNSL GSIIQSQQQL GDITQQSKQN LPSLQSHQLP 540 RNLPQTLQQQ QNQQQHIVGQ NQQQSVIQTQ LPDQVNQHLQ MSDNQIQIQL LQKLQQQQQS 600 LLTQQSVLQQ PSQFAQLQDP QRQLLEASQS FSRSMRPNQL LEMPQTTPNS LPQSNIIQQQ 660 MTKNGNQTNA QFSHMPQQLK LQQQQPGILS EMPGHMGLPP SSGVNHFSTV GSSILTAAAG 720 AGISGITEEL PSCSTSPSTN NCANMVHRVH QSTAIGDDMA QSAATLLSSN ALETMSCSTN 780 LVKDVQQKSD VKPSMNIAKN QNQGFFAPQT YQNGATAQTD YLDTSSSTTS VCVSQNDVHL 840 QQNNNSSSYN PHSLLLRDIS QDGELQANPR NNVPYGANID GQLGVLMNSD QVLTKSIIGL 900 GKDLPNNLSS AGMISNCENS KDPQHELSSS MVSRSFGVPD MAFNSIDSTI NDSSFLNRGP 960 WAPPPQFQRM RTYTKVYKRG AVGRSIDITR YSGYDELKQD LARRFGIEGQ LEDRHRIGWK 1020 LVYVDHENDV LLVGDDPWEE FVNCVRCIKI LSPQEVQQMS LDGDFGNSVH PNQACSSSDN 1080 GNA

Sequence ? help Back to Top

Protein Sequence Length: 1083 aa Download sequence

MKTPAISAGV SVAATSCVTT SNPAEGGENK SINPELWQAC AGPLVSLPAA GTLVVYFPQG  60
HSEQVAASMK KDVDAHIPNY PNLPSKLLCL LHNVTLHADP ETDEVYAQMT LQPVPSFDKD  120
ALLRSDLSLK SNKAQTEFFC KTLTASDTST HGGFSVPRRA AEKIFPPLDF SMQPPAQELV  180
ARDLHDNVWT FRHIYRGQPK RHLLTTGWSL FVSGKRLFAG DSVLFIRDEK QQLLLGIRRA  240
NKQPANLSSS VLSSDSMHIG ILAAAAHAAA NNSPFTVFYN PRASPSEFVI PLAKYYKAVY  300
SNQISLGMRF RMMFETEESG TRRYMGTITG ISDIDPVRWK NSQWRNLQVG WDESTAGERR  360
NRVSIWEIEP VTAPFFICPP PFFRSKRPRQ PGMPDDDSPD LDNLFKKSMP WLGDDFYMKD  420
PQSVPGLSLL QCINMQQNPS LANAMPPNYM QSLSGSVLQN LTGPDLSHQL GLSAPQLPQP  480
NNLQFNSQRL PLQSQQFDQL PKMQSSLNSL GSIIQSQQQL GDITQQSKQN LPSLQSHQLP  540
RNLPQTLQQQ QNQQQHIVGQ NQQQSVIQTQ LPDQVNQHLQ MSDNQIQIQL LQKLQQQQQS  600
LLTQQSVLQQ PSQFAQLQDP QRQLLEASQS FSRSMRPNQL LEMPQTTPNS LPQSNIIQQQ  660
MTKNGNQTNA QFSHMPQQLK LQQQQPGILS EMPGHMGLPP SSGVNHFSTV GSSILTAAAG  720
AGISGITEEL PSCSTSPSTN NCANMVHRVH QSTAIGDDMA QSAATLLSSN ALETMSCSTN  780
LVKDVQQKSD VKPSMNIAKN QNQGFFAPQT YQNGATAQTD YLDTSSSTTS VCVSQNDVHL  840
QQNNNSSSYN PHSLLLRDIS QDGELQANPR NNVPYGANID GQLGVLMNSD QVLTKSIIGL  900
GKDLPNNLSS AGMISNCENS KDPQHELSSS MVSRSFGVPD MAFNSIDSTI NDSSFLNRGP  960
WAPPPQFQRM RTYTKVYKRG AVGRSIDITR YSGYDELKQD LARRFGIEGQ LEDRHRIGWK  1020
LVYVDHENDV LLVGDDPWEE FVNCVRCIKI LSPQEVQQMS LDGDFGNSVH PNQACSSSDN  1080
GNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein