PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664839.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 1113aa MW: 123052 Da PI: 6.6732

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664839.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70.8	1.7e-22	139	240	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ +++++ ++l+ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++++ XP_021664839.1 139 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfSMQPPA-QELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFI--RDEK 230 99***************************9445444.38********************************************..5688 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 ++l+++++r+ XP_021664839.1 231 QQLLLGIRRA 240 889**997 PP
2	Auxin_resp	120.4	1.4e-39	265	348	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+v+YnPras+seFv++++k+ ka++ +++s+GmRf+m+fete+s +rr++Gt++g+sd+dpvrW+nS+Wr+L+ XP_021664839.1 265 AAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVYsNQISLGMRFRMMFETEESGTRRYMGTITGISDIDPVRWKNSQWRNLQ 348 79******************************9989******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1113 aa Download sequence
MKTPAISAGV SVAATSCVTT SNPAEGGENK SINPELWQAC AGPLVSLPAA GTLVVYFPQG 60 HSEQVAASMK KDVDAHIPNY PNLPSKLLCL LHNVTLHADP ETDEVYAQMT LQPVPSFDKD 120 ALLRSDLSLK SNKAQTEFFC KTLTASDTST HGGFSVPRRA AEKIFPPLDF SMQPPAQELV 180 ARDLHDNVWT FRHIYRGQPK RHLLTTGWSL FVSGKRLFAG DSVLFIRDEK QQLLLGIRRA 240 NKQPANLSSS VLSSDSMHIG ILAAAAHAAA NNSPFTVFYN PRASPSEFVI PLAKYYKAVY 300 SNQISLGMRF RMMFETEESG TRRYMGTITG ISDIDPVRWK NSQWRNLQVG WDESTAGERR 360 NRVSIWEIEP VTAPFFICPP PFFRSKRPRQ PGMPDDDSPD LDNLFKKSMP WLGDDFYMKD 420 PQSVPGLSLL QCINMQQNPS LANAMPPNYM QSLSGSVLQN LTGPDLSHQL GLSAPQLPQP 480 NNLQFNSQRL PLQSQQFDQL PKMQSSLNSL GSIIQSQQQL GDITQQSKQN LVTQTITSSQ 540 VQAQILQPQT LVQNTNILQQ QPSLQSHQLP RNLPQTLQQQ QNQQQHIVGQ NQQQSVIQTQ 600 LPDQVNQHLQ MSDNQIQIQL LQKLQQQQQS LLTQQSVLQQ PSQFAQLQDP QRQLLEASQS 660 FSRSMRPNQL LEMPQTTPNS LPQSNIIQQQ MTKNGNQTNA QFSHMPQQLK LQQQQPGILS 720 EMPGHMGLPP SSGVNHFSTV GSSILTAAAG AGISGITEEL PSCSTSPSTN NCANMVHRVH 780 QSTAIGDDMA QSAATLLSSN ALETMSCSTN LVKDVQQKSD VKPSMNIAKN QNQGFFAPQT 840 YQNGATAQTD YLDTSSSTTS VCVSQNDVHL QQNNNSSSYN PHSLLLRDIS QDGELQANPR 900 NNVPYGANID GQLGVLMNSD QVLTKSIIGL GKDLPNNLSS AGMISNCENS KDPQHELSSS 960 MVSRSFGVPD MAFNSIDSTI NDSSFLNRGP WAPPPQFQRM RTYTKVYKRG AVGRSIDITR 1020 YSGYDELKQD LARRFGIEGQ LEDRHRIGWK LVYVDHENDV LLVGDDPWEE FVNCVRCIKI 1080 LSPQEVQQMS LDGDFGNSVH PNQACSSSDN GNA

Sequence ? help Back to Top

Protein Sequence Length: 1113 aa Download sequence

MKTPAISAGV SVAATSCVTT SNPAEGGENK SINPELWQAC AGPLVSLPAA GTLVVYFPQG  60
HSEQVAASMK KDVDAHIPNY PNLPSKLLCL LHNVTLHADP ETDEVYAQMT LQPVPSFDKD  120
ALLRSDLSLK SNKAQTEFFC KTLTASDTST HGGFSVPRRA AEKIFPPLDF SMQPPAQELV  180
ARDLHDNVWT FRHIYRGQPK RHLLTTGWSL FVSGKRLFAG DSVLFIRDEK QQLLLGIRRA  240
NKQPANLSSS VLSSDSMHIG ILAAAAHAAA NNSPFTVFYN PRASPSEFVI PLAKYYKAVY  300
SNQISLGMRF RMMFETEESG TRRYMGTITG ISDIDPVRWK NSQWRNLQVG WDESTAGERR  360
NRVSIWEIEP VTAPFFICPP PFFRSKRPRQ PGMPDDDSPD LDNLFKKSMP WLGDDFYMKD  420
PQSVPGLSLL QCINMQQNPS LANAMPPNYM QSLSGSVLQN LTGPDLSHQL GLSAPQLPQP  480
NNLQFNSQRL PLQSQQFDQL PKMQSSLNSL GSIIQSQQQL GDITQQSKQN LVTQTITSSQ  540
VQAQILQPQT LVQNTNILQQ QPSLQSHQLP RNLPQTLQQQ QNQQQHIVGQ NQQQSVIQTQ  600
LPDQVNQHLQ MSDNQIQIQL LQKLQQQQQS LLTQQSVLQQ PSQFAQLQDP QRQLLEASQS  660
FSRSMRPNQL LEMPQTTPNS LPQSNIIQQQ MTKNGNQTNA QFSHMPQQLK LQQQQPGILS  720
EMPGHMGLPP SSGVNHFSTV GSSILTAAAG AGISGITEEL PSCSTSPSTN NCANMVHRVH  780
QSTAIGDDMA QSAATLLSSN ALETMSCSTN LVKDVQQKSD VKPSMNIAKN QNQGFFAPQT  840
YQNGATAQTD YLDTSSSTTS VCVSQNDVHL QQNNNSSSYN PHSLLLRDIS QDGELQANPR  900
NNVPYGANID GQLGVLMNSD QVLTKSIIGL GKDLPNNLSS AGMISNCENS KDPQHELSSS  960
MVSRSFGVPD MAFNSIDSTI NDSSFLNRGP WAPPPQFQRM RTYTKVYKRG AVGRSIDITR  1020
YSGYDELKQD LARRFGIEGQ LEDRHRIGWK LVYVDHENDV LLVGDDPWEE FVNCVRCIKI  1080
LSPQEVQQMS LDGDFGNSVH PNQACSSSDN GNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein