PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664832.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 678aa MW: 74291.4 Da PI: 5.4498

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664832.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.6	1.1e-13	500	546	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YIk+Lq XP_021664832.1 500 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAIAYIKELQ 546 799*********************6.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
MTDYRIPPTM NLWTDDNASV MEAFMNSDLA ALWPPPQSAA STSTSAPAPH NADSNRNTLI 60 NQSQPLFNQE TLQHRLQALI EGARESWTYA IFWQSSYDYS GVSVLGWGDG YYKGEEDKGK 120 GISKGPSSSA ADQEHRKKVL RELNSLISGS TTVTDDAIDE EVTDTEWFFL VSMTQSFVNG 180 SGLPGQAFFN GSPVWVTGPD RLSASPCERA RQGQVFGLQT LVCVPSANGV VELGSSEMIY 240 QSSDLMNKVR VLFNFNNLDV GSWPMGTNPD QGENDPSSLW ISDASHSGIE MKDGNSTVPS 300 SNGTTNGNNN QHGSKGIQFG IPNSSSATEN PSGIHMQNHR QGQQQQQQQM TQTQSFLTRE 360 LNFGEYSVFE GSSARNGNSN VLKPESGEIL NFGESKRTSC SANGNFFSGH SQFAVEENNK 420 KKRSPTSRGS NEEGMLSFTS GVILPSSGMV KSSGGPGDSD HSDLEASVVR ETDSSKVVEP 480 EKKPRKRGRK PANGREEPLN HVEAERQRRE KLNQRFYALR AVVPNVSKMD KASLLGDAIA 540 YIKELQAKLQ TAESDKEEME KQVESMKEEF ASKDSRPGPP PPDQELKMSN KHGSKAMEMD 600 IDVKIIGCDA MIRIQCSKKN HPAARLMAAL KELDLEVNHA SVSVVNDLMI QQATVKMGSR 660 FYTQEQLRIA LSTKVGDT

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

MTDYRIPPTM NLWTDDNASV MEAFMNSDLA ALWPPPQSAA STSTSAPAPH NADSNRNTLI  60
NQSQPLFNQE TLQHRLQALI EGARESWTYA IFWQSSYDYS GVSVLGWGDG YYKGEEDKGK  120
GISKGPSSSA ADQEHRKKVL RELNSLISGS TTVTDDAIDE EVTDTEWFFL VSMTQSFVNG  180
SGLPGQAFFN GSPVWVTGPD RLSASPCERA RQGQVFGLQT LVCVPSANGV VELGSSEMIY  240
QSSDLMNKVR VLFNFNNLDV GSWPMGTNPD QGENDPSSLW ISDASHSGIE MKDGNSTVPS  300
SNGTTNGNNN QHGSKGIQFG IPNSSSATEN PSGIHMQNHR QGQQQQQQQM TQTQSFLTRE  360
LNFGEYSVFE GSSARNGNSN VLKPESGEIL NFGESKRTSC SANGNFFSGH SQFAVEENNK  420
KKRSPTSRGS NEEGMLSFTS GVILPSSGMV KSSGGPGDSD HSDLEASVVR ETDSSKVVEP  480
EKKPRKRGRK PANGREEPLN HVEAERQRRE KLNQRFYALR AVVPNVSKMD KASLLGDAIA  540
YIKELQAKLQ TAESDKEEME KQVESMKEEF ASKDSRPGPP PPDQELKMSN KHGSKAMEMD  600
IDVKIIGCDA MIRIQCSKKN HPAARLMAAL KELDLEVNHA SVSVVNDLMI QQATVKMGSR  660
FYTQEQLRIA LSTKVGDT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	482	490	KKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	0.0	bHLH family protein