PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664002.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 552aa MW: 60661.6 Da PI: 7.5459

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664002.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.7	2.4e-33	226	283	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k XP_021664002.1 226 DDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGQITEIVYKGSHNHPK 283 8**************************************.*************85 PP
2	WRKY	105.9	2.2e-33	386	444	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts gCpv+k+ver+++d+++v++tYeg+Hnh+ XP_021664002.1 386 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSVGCPVRKHVERASHDTRAVITTYEGKHNHD 444 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MTSSFTSSSF TNLLPTHTKD MDSISWGLYD HGTDRIDIEI PQFKSFPPPS LPLSPPPVSP 60 SSYLAIPPGL SPNELLDSPV LFSTSNVLLS PTTGAFAGQT FNWRNNSSDN QRGVRGDGKS 120 FSDFSFQTQT TPPTSSSIFQ SSSSLVSVEQ SIKRQQETWN FNKPTKQTGF SSEKGVVKSE 180 FRSMQSYSSE MAAFQSSIQC NAASQPSYNH YNNQPPPYMR EQRRSDDGYN WRKYGQKQVK 240 GSENPRSYYK CTYPNCPTKK KVERSLDGQI TEIVYKGSHN HPKPQSTRST SQSMPPSAGV 300 SSEISDQSVS PLESVTVQED SSISIGDDEF DQSSPISNSG GDDDENEPEA KRFKGKNENE 360 GILAAGSRTV REPRIVVQTT SDIDILDDGY RWRKYGQKVV KGNPNPRSYY KCTSVGCPVR 420 KHVERASHDT RAVITTYEGK HNHDVPAARS SGYASNRPPS NANSSNMPIP IRPSVTTNAN 480 YPSSLNSTRL PTSAGQAPFT LEMLQGTGGI GFSGFGKPTG SYMNQTQYIT EGAYSGAKEE 540 PKDDSFLDSF LC

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MTSSFTSSSF TNLLPTHTKD MDSISWGLYD HGTDRIDIEI PQFKSFPPPS LPLSPPPVSP  60
SSYLAIPPGL SPNELLDSPV LFSTSNVLLS PTTGAFAGQT FNWRNNSSDN QRGVRGDGKS  120
FSDFSFQTQT TPPTSSSIFQ SSSSLVSVEQ SIKRQQETWN FNKPTKQTGF SSEKGVVKSE  180
FRSMQSYSSE MAAFQSSIQC NAASQPSYNH YNNQPPPYMR EQRRSDDGYN WRKYGQKQVK  240
GSENPRSYYK CTYPNCPTKK KVERSLDGQI TEIVYKGSHN HPKPQSTRST SQSMPPSAGV  300
SSEISDQSVS PLESVTVQED SSISIGDDEF DQSSPISNSG GDDDENEPEA KRFKGKNENE  360
GILAAGSRTV REPRIVVQTT SDIDILDDGY RWRKYGQKVV KGNPNPRSYY KCTSVGCPVR  420
KHVERASHDT RAVITTYEGK HNHDVPAARS SGYASNRPPS NANSSNMPIP IRPSVTTNAN  480
YPSSLNSTRL PTSAGQAPFT LEMLQGTGGI GFSGFGKPTG SYMNQTQYIT EGAYSGAKEE  540
PKDDSFLDSF LC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-121	WRKY family protein