PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021661828.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARF
Protein Properties Length: 536aa    MW: 59852.5 Da    PI: 9.386
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021661828.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.41.5e-2413114199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae++       +  ++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F   + +
  XP_021661828.1  13 FCKTLTASDTSTHGGFSVPRRAAEDCfppldytQ--QRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGE 103
                     99****************************9743..345679************************************************..449 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     ++el+++++r+
  XP_021661828.1 104 DGELRLGIRRA 114
                     999*****996 PP
2Auxin_resp122.53.1e-40139220182
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                     +++a++++svF+++YnPras+seF+++ +k++k+l++++s+GmRfkm+feted++err++G+++g+sdldp rWp+SkWr+L
  XP_021661828.1 139 VVNAMTMRSVFNIYYNPRASSSEFIIPSRKFLKSLDHSFSIGMRFKMRFETEDAAERRCMGIITGISDLDPARWPGSKWRCL 220
                     68999****************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 536 aa     Download sequence    
MEAAVKSTTP HMFCKTLTAS DTSTHGGFSV PRRAAEDCFP PLDYTQQRPS QELVAKDLHG  60
FEWRFRHIYR GQPRRHLLTT GWSAFVNKKK LVSGDAVLFL RGEDGELRLG IRRAAQVKCG  120
ATLPALCTQQ LNHSTLTDVV NAMTMRSVFN IYYNPRASSS EFIIPSRKFL KSLDHSFSIG  180
MRFKMRFETE DAAERRCMGI ITGISDLDPA RWPGSKWRCL VVRWDDMETS RHSRVSPWEI  240
EPSGPVSSSS NFMAPGLKRS RSGLPSSKPE FPVPDGIGVS DFGESSRFQK VLQGQEISSF  300
NPLYDGGDQN RHPSETRRCF PSTIGSGIAT TRNGARDPIV NSDISRKGIG FSESFRFHKV  360
LQGQEIIPSS TFGRYPTATN EGYNTRMCLP KQEEQGVSIR SWFHNPETYG EKHTSSLHIL  420
RRDDQWGMGS FSKSCGPIQH GISPLVAQST FRRGQDIVSS CKSSCRLFGF QLTEDRHVAN  480
KDDNSSIPVT SLNLGSPFLP HGGDQFHLKP PAITNAVGSN CTKGILQKNP ENYDIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.11e-157ARF family protein