PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021661520.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 683aa MW: 78373.4 Da PI: 8.0772

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021661520.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.4	3.7e-21	66	159	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+e+A+++GFs+r+++++ + + t+r fvC + g++ + ++++k +r+r+++r+gC+a ++++k + +w+vt + ++HnHel XP_021661520.1 66 EFYSEFARRCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPVKASNESKPQRNRKSSRCGCQAYMRISKATeigMPEWRVTGFANHHNHELL 159 6************9998877356667999***********99999****************99877789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 683 aa Download sequence
MRNMMSEEAG QMLVVYDDPS DQRSVSLDDT SSTEESPDKT RLSLETTNDA IPYIGQRFAT 60 HDAAYEFYSE FARRCGFSIR RHRTEGKDGV GKGLTRRYFV CHRAGNTPVK ASNESKPQRN 120 RKSSRCGCQA YMRISKATEI GMPEWRVTGF ANHHNHELLE PNQVRFLPAY RTISDADKSR 180 ILMFAKTGIS VQQMMRLMEL EKCVEPGYLP FTEKDVRNLI QSFRKLDPEE ESIDLLRMCR 240 NIKEKDPNFK FEYTLDSNNR LENIAWSYAS SIQSYDIFGD AVVFDTTHRL TAFDMPLGIW 300 VGVNNYGMPC FFGCVLLREE NLRLLSWALK AFLGFMNGKA PQTILTDQNM CLKEAIAMEM 360 PTTKHALCIW MTVAKFPSWF NAVLGERYTE WKAEFHRLYN LESIEDFELG WRDMVNSFGL 420 HNNRHLANLY TLRTLWALPY LRSHFFAGMT AAGYSKSINA FIQRFLSAQT RLAHFVEQVA 480 VAVDFKDQAA EQQTMQQNLQ NICLKTGAPM ESHAATVLTP YAFSKLQEQL VLANHYASFQ 540 MEDGFLVRHH TKLEGGRKVY WVPREGIISC SCHQFEFSGI LCRHALRVLS TGNCFQIPER 600 YLPTRWSRIS TTPAKLLHGS PNDHGERIQL LQNMVSTLIT ESAKSKERLD IATEQVSILL 660 SRIREQPVPS HGVREIASTH QNI

Sequence ? help Back to Top

Protein Sequence Length: 683 aa Download sequence

MRNMMSEEAG QMLVVYDDPS DQRSVSLDDT SSTEESPDKT RLSLETTNDA IPYIGQRFAT  60
HDAAYEFYSE FARRCGFSIR RHRTEGKDGV GKGLTRRYFV CHRAGNTPVK ASNESKPQRN  120
RKSSRCGCQA YMRISKATEI GMPEWRVTGF ANHHNHELLE PNQVRFLPAY RTISDADKSR  180
ILMFAKTGIS VQQMMRLMEL EKCVEPGYLP FTEKDVRNLI QSFRKLDPEE ESIDLLRMCR  240
NIKEKDPNFK FEYTLDSNNR LENIAWSYAS SIQSYDIFGD AVVFDTTHRL TAFDMPLGIW  300
VGVNNYGMPC FFGCVLLREE NLRLLSWALK AFLGFMNGKA PQTILTDQNM CLKEAIAMEM  360
PTTKHALCIW MTVAKFPSWF NAVLGERYTE WKAEFHRLYN LESIEDFELG WRDMVNSFGL  420
HNNRHLANLY TLRTLWALPY LRSHFFAGMT AAGYSKSINA FIQRFLSAQT RLAHFVEQVA  480
VAVDFKDQAA EQQTMQQNLQ NICLKTGAPM ESHAATVLTP YAFSKLQEQL VLANHYASFQ  540
MEDGFLVRHH TKLEGGRKVY WVPREGIISC SCHQFEFSGI LCRHALRVLS TGNCFQIPER  600
YLPTRWSRIS TTPAKLLHGS PNDHGERIQL LQNMVSTLIT ESAKSKERLD IATEQVSILL  660
SRIREQPVPS HGVREIASTH QNI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein