PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021661223.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 469aa MW: 50757.2 Da PI: 5.0987

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021661223.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.7	1.3e-05	362	399	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L XP_021661223.1 362 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 399 677888999*****998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MAEEFQTGIC GGNWCSLSTS VFMGGSSPCS TGINANDMGT YGSWMEPRSC KLDSNNISNN 60 SNSLSEGSVI LQDSQKPQQT DSDSAGSSIL MDSTLQMMGF GLSSSSSSSS DWSQTLLRGN 120 GRAENYNSIL QEEMNSSGIN TCSQIRKDWS PKSFTSTGED SAINAFKAIN QDFSLEQQRL 180 NPLSSPGNST AATCQGLSTG FSMGSASYGY PSALIQSLFD PDPQPQQSLF NNRNMNYSSP 240 SNYGNILNEL SPSWPKLAPF LKPSLPKQQQ LPAGGLHFSN NTPFWNASAT ALNDIGASFI 300 PSSQPQFLVP TFDEKPSCPN FNPKTNNEEV RDSGSVVKKG SEPAFKRPRI ETPSPLPTFK 360 VRKEKLGDRI TALQQLVSPF GKTDTASVLH EAIEYIKFLH DQVSVLSTPY MKNGSPIQHH 420 QGAENLNDPE GSKDLKSRGL CLVPISSTFP VANETTADFW TPTFGGTFR

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MAEEFQTGIC GGNWCSLSTS VFMGGSSPCS TGINANDMGT YGSWMEPRSC KLDSNNISNN  60
SNSLSEGSVI LQDSQKPQQT DSDSAGSSIL MDSTLQMMGF GLSSSSSSSS DWSQTLLRGN  120
GRAENYNSIL QEEMNSSGIN TCSQIRKDWS PKSFTSTGED SAINAFKAIN QDFSLEQQRL  180
NPLSSPGNST AATCQGLSTG FSMGSASYGY PSALIQSLFD PDPQPQQSLF NNRNMNYSSP  240
SNYGNILNEL SPSWPKLAPF LKPSLPKQQQ LPAGGLHFSN NTPFWNASAT ALNDIGASFI  300
PSSQPQFLVP TFDEKPSCPN FNPKTNNEEV RDSGSVVKKG SEPAFKRPRI ETPSPLPTFK  360
VRKEKLGDRI TALQQLVSPF GKTDTASVLH EAIEYIKFLH DQVSVLSTPY MKNGSPIQHH  420
QGAENLNDPE GSKDLKSRGL CLVPISSTFP VANETTADFW TPTFGGTFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.1	2e-71	bHLH family protein