PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021661068.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 681aa MW: 74585.3 Da PI: 5.6875

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021661068.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.9	3.7e-13	503	548	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YIk+L XP_021661068.1 503 NHVEAERQRREKLNQRFYSLRAVVPNV-----SKMDKASLLGDAISYIKEL 548 799*********************6.....5**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 681 aa Download sequence
MTDYRITPTM NLWTDDNASV MEAFMNSDLA SLWPPPQSAA STSTPAPPNA DPNRSFINQS 60 QPLFNQETLQ QRLQVLIEGA RESWTYAIFW QSSDDYSGAS VLGWGDGYYK GEEDKGKGKS 120 KTPSSSVADQ EHRKKVLREL NSLISGPTAV TDDAVDEEVT DTEWFFLISM TQSFVNGSGL 180 PGQAYFNGNP VWVAGPDRLS TSPCERARQG QVFGLQTLVC IPSANGVVEL GSTEVIYQSS 240 DLMNKVRVLF NFSNLEVGSW PIGTNPDQGE NDPSSLWISD PSQSGIEMKD GNSTVPSSGG 300 TTNGNNNNSN NNNNHHGSKG IQFGNPNSSS VTEHPSGIHM QNHHQGHQQQ QQTTQTQSFF 360 TRELNFGEYS AFDGSSARNG NSNLLKPESG EILNFGESKR SSCSANGNFF SGHSQVAVEE 420 NNKKKRSPTS RGSNEEGMLS FTSGVVLPSS GVVKSSGGTG DSDQSDLEAS VVRQTDSSKV 480 VEPEKRPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY SLRAVVPNVS KMDKASLLGD 540 AISYIKELKS KLQASESVKE ELEKQVESLK KEFANNDSCL GPPPRDQELK TSNTHGSKAI 600 EIDIDVKIIG WDAMIRIQCS KKNHPAARLM AALKELDLDV NHASVSVVND LMIQQATVKM 660 GSRYYTQEQL RVALSTKVGD T

Sequence ? help Back to Top

Protein Sequence Length: 681 aa Download sequence

MTDYRITPTM NLWTDDNASV MEAFMNSDLA SLWPPPQSAA STSTPAPPNA DPNRSFINQS  60
QPLFNQETLQ QRLQVLIEGA RESWTYAIFW QSSDDYSGAS VLGWGDGYYK GEEDKGKGKS  120
KTPSSSVADQ EHRKKVLREL NSLISGPTAV TDDAVDEEVT DTEWFFLISM TQSFVNGSGL  180
PGQAYFNGNP VWVAGPDRLS TSPCERARQG QVFGLQTLVC IPSANGVVEL GSTEVIYQSS  240
DLMNKVRVLF NFSNLEVGSW PIGTNPDQGE NDPSSLWISD PSQSGIEMKD GNSTVPSSGG  300
TTNGNNNNSN NNNNHHGSKG IQFGNPNSSS VTEHPSGIHM QNHHQGHQQQ QQTTQTQSFF  360
TRELNFGEYS AFDGSSARNG NSNLLKPESG EILNFGESKR SSCSANGNFF SGHSQVAVEE  420
NNKKKRSPTS RGSNEEGMLS FTSGVVLPSS GVVKSSGGTG DSDQSDLEAS VVRQTDSSKV  480
VEPEKRPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY SLRAVVPNVS KMDKASLLGD  540
AISYIKELKS KLQASESVKE ELEKQVESLK KEFANNDSCL GPPPRDQELK TSNTHGSKAI  600
EIDIDVKIIG WDAMIRIQCS KKNHPAARLM AALKELDLDV NHASVSVVND LMIQQATVKM  660
GSRYYTQEQL RVALSTKVGD T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	485	493	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	0.0	bHLH family protein