PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021661025.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 529aa MW: 54955.2 Da PI: 8.171

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021661025.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	129.3	3.9e-40	159	264	2	113
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa 95 +++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLl+qa++ai+++tgt++++a+++ + s +ss+s+ s++ XP_021661025.1 159 TPAKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLRQAEHAIIAATGTGTIPANFStLNISLRSSGSTLSAP------- 246 789******************************************************************9997777777777743333....... PP TCP 96 kskksqksaasalnlake 113 +sk++++s + al+la++ XP_021661025.1 247 PSKSAPHSFHGALALAHH 264 444444444444444443 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MELTDMQSNK KNNNAQEPHQ SHHQQHHHHH PQVSFDGRSS GGPSPVGPFM GSISIQAGLS 60 HAASHVHHHL HGLASSTPTT TGSAPSTSSS SLSSSSSSSS TSTSTSSAAP PHLVDASLAI 120 ATRSGPFLGS AKKNQQQQNL SIVTTTSTTT STTTYVAATP AKRSTKDRHT KVDGRGRRIR 180 MPATCAARVF QLTRELGHKS DGETIEWLLR QAEHAIIAAT GTGTIPANFS TLNISLRSSG 240 STLSAPPSKS APHSFHGALA LAHHPHYEEG FAHTALLGFH HQLQHQQHLM AADQVAEALP 300 SGAEALPSGG GERGGGESGG VAGGDSGENY MRKRFREDLF KEDSQQQQQG ESVSGGTSGG 360 GVGGGSPIKG FKSGLQLPKP QQQDTVSSGI LRSSNAGGAG GGPAVATGTT GAGPSEPQPQ 420 MWPFSTATPP SVNSVQAPLH FMPRFNLSGN LEFQGGRGNA LQLGSMLMQQ QPSQHLGLGM 480 AESNLGMLAA LNAYSRGGLN MNSEHNNPLD QHQQPQGTNS GDQDPNSSQ

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MELTDMQSNK KNNNAQEPHQ SHHQQHHHHH PQVSFDGRSS GGPSPVGPFM GSISIQAGLS  60
HAASHVHHHL HGLASSTPTT TGSAPSTSSS SLSSSSSSSS TSTSTSSAAP PHLVDASLAI  120
ATRSGPFLGS AKKNQQQQNL SIVTTTSTTT STTTYVAATP AKRSTKDRHT KVDGRGRRIR  180
MPATCAARVF QLTRELGHKS DGETIEWLLR QAEHAIIAAT GTGTIPANFS TLNISLRSSG  240
STLSAPPSKS APHSFHGALA LAHHPHYEEG FAHTALLGFH HQLQHQQHLM AADQVAEALP  300
SGAEALPSGG GERGGGESGG VAGGDSGENY MRKRFREDLF KEDSQQQQQG ESVSGGTSGG  360
GVGGGSPIKG FKSGLQLPKP QQQDTVSSGI LRSSNAGGAG GGPAVATGTT GAGPSEPQPQ  420
MWPFSTATPP SVNSVQAPLH FMPRFNLSGN LEFQGGRGNA LQLGSMLMQQ QPSQHLGLGM  480
AESNLGMLAA LNAYSRGGLN MNSEHNNPLD QHQQPQGTNS GDQDPNSSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	3e-56	TCP family protein