PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021660825.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 485aa MW: 50549.3 Da PI: 7.3839

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021660825.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	130.3	1.9e-40	93	198	2	113
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa 95 ++ k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLl+qa+pai+++tgt++++a+++ ++s +ss+s+ s++ XP_021660825.1 93 TPPKRSSKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLRQAEPAIIAATGTGTIPANFStLNVSLRSSGSTLSAP------- 180 6789*****************************************************************9997788888887744443....... PP TCP 96 kskksqksaasalnlake 113 +sk++++s + al+la++ XP_021660825.1 181 PSKSAPHSFHGALALAHH 198 444444444444444443 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MADHQEDHLQ APSWAPSLSK LTCLMLLTST TANIMVLLPQ LLTLLAPPHL VDASLAIATR 60 SGSLLDSTKK NQQENLSIVT TASTTTTTSV TATPPKRSSK DRHTKVDGRG RRIRMPAMCA 120 ARVFQLTREL GHKSDGETIE WLLRQAEPAI IAATGTGTIP ANFSTLNVSL RSSGSTLSAP 180 PSKSAPHSFH GALALAHHPH YEEGFAHTAL LGFHHQQQQH LMTADQIAEA LPSGGGGGGG 240 GSGGGAGGDS GENYMRKRFR EDLFKDDSQQ QQGESGGGTS GGGGGGTGGE GSPGKVFKSG 300 LQLPKPQQQD TGSSGLLRPS NILPPTAMWA MAPAPSSGST IWMLPVTAGG AGGGPAIATA 360 TTRAGPSEPQ PQMWPFSSAT PASGNSIQAP LHFVPRFNLP GNLEFQGGRG NALQLGSMLM 420 QQQQPSQHLG LGMAESNLGM LAALNAYSRG GLNINSEQNN PLNQHHQHQQ PQDTNSGDED 480 PNSSQ

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MADHQEDHLQ APSWAPSLSK LTCLMLLTST TANIMVLLPQ LLTLLAPPHL VDASLAIATR  60
SGSLLDSTKK NQQENLSIVT TASTTTTTSV TATPPKRSSK DRHTKVDGRG RRIRMPAMCA  120
ARVFQLTREL GHKSDGETIE WLLRQAEPAI IAATGTGTIP ANFSTLNVSL RSSGSTLSAP  180
PSKSAPHSFH GALALAHHPH YEEGFAHTAL LGFHHQQQQH LMTADQIAEA LPSGGGGGGG  240
GSGGGAGGDS GENYMRKRFR EDLFKDDSQQ QQGESGGGTS GGGGGGTGGE GSPGKVFKSG  300
LQLPKPQQQD TGSSGLLRPS NILPPTAMWA MAPAPSSGST IWMLPVTAGG AGGGPAIATA  360
TTRAGPSEPQ PQMWPFSSAT PASGNSIQAP LHFVPRFNLP GNLEFQGGRG NALQLGSMLM  420
QQQQPSQHLG LGMAESNLGM LAALNAYSRG GLNINSEQNN PLNQHHQHQQ PQDTNSGDED  480
PNSSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	4e-59	TCP family protein