PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021660824.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 547aa MW: 56717.2 Da PI: 8.1462

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021660824.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	130	2.4e-40	155	260	2	113
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa 95 ++ k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLl+qa+pai+++tgt++++a+++ ++s +ss+s+ s++ XP_021660824.1 155 TPPKRSSKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLRQAEPAIIAATGTGTIPANFStLNVSLRSSGSTLSAP------- 242 6789*****************************************************************9997788888887744443....... PP TCP 96 kskksqksaasalnlake 113 +sk++++s + al+la++ XP_021660824.1 243 PSKSAPHSFHGALALAHH 260 444444444444444443 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MELTGMQSNK QNNTAKEPHQ SHHQQQHHHQ VLFDGRSSGG PSPGPFMGSI SIQADLSHAS 60 HVHHRQHHGL ASSAPNTSGY APSNSSSSLS SSSSSSSSST STSTSSAAPP HLVDASLAIA 120 TRSGSLLDST KKNQQENLSI VTTASTTTTT SVTATPPKRS SKDRHTKVDG RGRRIRMPAM 180 CAARVFQLTR ELGHKSDGET IEWLLRQAEP AIIAATGTGT IPANFSTLNV SLRSSGSTLS 240 APPSKSAPHS FHGALALAHH PHYEEGFAHT ALLGFHHQQQ QHLMTADQIA EALPSGGGGG 300 GGGSGGGAGG DSGENYMRKR FREDLFKDDS QQQQGESGGG TSGGGGGGTG GEGSPGKVFK 360 SGLQLPKPQQ QDTGSSGLLR PSNILPPTAM WAMAPAPSSG STIWMLPVTA GGAGGGPAIA 420 TATTRAGPSE PQPQMWPFSS ATPASGNSIQ APLHFVPRFN LPGNLEFQGG RGNALQLGSM 480 LMQQQQPSQH LGLGMAESNL GMLAALNAYS RGGLNINSEQ NNPLNQHHQH QQPQDTNSGD 540 EDPNSSQ

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MELTGMQSNK QNNTAKEPHQ SHHQQQHHHQ VLFDGRSSGG PSPGPFMGSI SIQADLSHAS  60
HVHHRQHHGL ASSAPNTSGY APSNSSSSLS SSSSSSSSST STSTSSAAPP HLVDASLAIA  120
TRSGSLLDST KKNQQENLSI VTTASTTTTT SVTATPPKRS SKDRHTKVDG RGRRIRMPAM  180
CAARVFQLTR ELGHKSDGET IEWLLRQAEP AIIAATGTGT IPANFSTLNV SLRSSGSTLS  240
APPSKSAPHS FHGALALAHH PHYEEGFAHT ALLGFHHQQQ QHLMTADQIA EALPSGGGGG  300
GGGSGGGAGG DSGENYMRKR FREDLFKDDS QQQQGESGGG TSGGGGGGTG GEGSPGKVFK  360
SGLQLPKPQQ QDTGSSGLLR PSNILPPTAM WAMAPAPSSG STIWMLPVTA GGAGGGPAIA  420
TATTRAGPSE PQPQMWPFSS ATPASGNSIQ APLHFVPRFN LPGNLEFQGG RGNALQLGSM  480
LMQQQQPSQH LGLGMAESNL GMLAALNAYS RGGLNINSEQ NNPLNQHHQH QQPQDTNSGD  540
EDPNSSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	1e-58	TCP family protein