PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021660672.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 798aa MW: 88305 Da PI: 6.8224

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021660672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.3	4.1e-09	52	94	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+e + a +q G++ +++I r+++ + q++++++ + XP_021660672.1 52 AWTREEEESFFTALRQVGKN-FEKITRRVQ-SKNKDQVRHYYYRL 94 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 798 aa Download sequence
MEMESQVSLD STVHSHNENT SIQHGDTGIT SSIPDHVKPQ QPAKKPTRQW AAWTREEEES 60 FFTALRQVGK NFEKITRRVQ SKNKDQVRHY YYRLVRRMNK LLGPGLCLDA KNSKDTNAAM 120 LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LENQLLKDRK KNVRKRPSQV ENVSPPVPST 180 VTSQNRASTH ETRTVKLVLV DSQNLQRLGA GKGSLKRNVN IGVIRGNRGD STAMKPARQR 240 RKQVGVVLSA AYKKWEKAAI AGVSLVADAA EHLERTATDK EIEPDHHMAE HKSPDAIEKG 300 LPPLSAFSQN HYVNAQTNMK LKLQLFPIDD GTRRALEMDK HNPHLELTLS TRKKISSVLE 360 HLNRKWGNSS IASGELMLFP YSALRENLVG NQRWTQDSIV SALDVYTSIG SPSVFRLRYG 420 WFSNIELASV TLQAPSASSS IPGGNSIDME NEKRKTVDSI TTSGLSTNDR SEKNMDLCKD 480 QLSTGIKSHD YALSSTDVPN DLSGYIATGP RNNFDGSLDP AAKVSWHEKE TGDRTNMKQS 540 DAAGHLRLYN GTALSAGEWA DSLTNISVGD LLSEVPHDVD PNCIELSIAQ SSQCLQQIPF 600 SCDSFDAAIA AHMSRHQNKI VSPSTVASHT FSIWDAEETC DAFSFQKNHA LHQEIPTSID 660 AVSPGAGKQT NSMVSGAFVE GLPSGEGPVD YPAETEPMDD CSPDPLVVDN LTKDFTGLTD 720 IYWPESLGPL DLDIPSSKYH SEEFILNDSL SGLNRLIASS LDAFQNCSFF GLDEKDSIPV 780 VEARETSSFS DFKIGSGV

Sequence ? help Back to Top

Protein Sequence Length: 798 aa Download sequence

MEMESQVSLD STVHSHNENT SIQHGDTGIT SSIPDHVKPQ QPAKKPTRQW AAWTREEEES  60
FFTALRQVGK NFEKITRRVQ SKNKDQVRHY YYRLVRRMNK LLGPGLCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LENQLLKDRK KNVRKRPSQV ENVSPPVPST  180
VTSQNRASTH ETRTVKLVLV DSQNLQRLGA GKGSLKRNVN IGVIRGNRGD STAMKPARQR  240
RKQVGVVLSA AYKKWEKAAI AGVSLVADAA EHLERTATDK EIEPDHHMAE HKSPDAIEKG  300
LPPLSAFSQN HYVNAQTNMK LKLQLFPIDD GTRRALEMDK HNPHLELTLS TRKKISSVLE  360
HLNRKWGNSS IASGELMLFP YSALRENLVG NQRWTQDSIV SALDVYTSIG SPSVFRLRYG  420
WFSNIELASV TLQAPSASSS IPGGNSIDME NEKRKTVDSI TTSGLSTNDR SEKNMDLCKD  480
QLSTGIKSHD YALSSTDVPN DLSGYIATGP RNNFDGSLDP AAKVSWHEKE TGDRTNMKQS  540
DAAGHLRLYN GTALSAGEWA DSLTNISVGD LLSEVPHDVD PNCIELSIAQ SSQCLQQIPF  600
SCDSFDAAIA AHMSRHQNKI VSPSTVASHT FSIWDAEETC DAFSFQKNHA LHQEIPTSID  660
AVSPGAGKQT NSMVSGAFVE GLPSGEGPVD YPAETEPMDD CSPDPLVVDN LTKDFTGLTD  720
IYWPESLGPL DLDIPSSKYH SEEFILNDSL SGLNRLIASS LDAFQNCSFF GLDEKDSIPV  780
VEARETSSFS DFKIGSGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.3	0.0	MYB_related family protein