PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021660039.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 494aa    MW: 54498.5 Da    PI: 6.0499
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021660039.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS332.11.1e-1011054881374
            GRAS   1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlar....svselykalppsetsekn...sseelaalklfs 85 
                     lv+lL+++Aea++  +++  la+ +L rl+el+sp++ ++m+Rlaayft AL+  l +     v++l +  p  + ++++   ++++laa++l++
  XP_021660039.1 105 LVHLLMAVAEALTGVNKSrdLARVILVRLKELVSPNDgTNMERLAAYFTDALQGLLEGagggPVKHLINNGPYHHHHRDDhhhQADVLAAFQLLQ 199
                     68***********96665559***********8887669*****************9932222345555544444444447889999******** PP

            GRAS  86 evsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAeelgvpf 176
                     ++sP++kf+h+taNqaIleav++++rvHi+D+di++G+QW++L+q+L +R++gpp  +lRiT++++  ++  s  +++etg+rL  fA+++g pf
  XP_021660039.1 200 DMSPYVKFGHFTANQAILEAVAQDRRVHIVDYDIMEGIQWASLMQSLVARKDGPPtpHLRITALSRGGNSrrSIGTVQETGRRLVAFAASIGQPF 294
                     ***************************************************776556********9777678999******************** PP

            GRAS 177 efnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfds 270
                     +f+    ++  ++++++L++ +gEal+ n++l+l ++  +     + + ++L   k+l+P++v++ve+e+   +++ F+ rf+++l++ysal+ds
  XP_021660039.1 295 SFHQCRLDSDGSFRPSALKLVKGEALVMNCMLHLPHFNYRAP---DSIASFLCGAKTLNPRLVTLVEEEVGPiGDGGFVGRFMDSLHHYSALYDS 386
                     ****9999999**************************84444...44569*******************9988********************** PP

            GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkd 364
                     lea++p +s++r+ vEr++lg++i   +a   + r    e+   W +++++ GFkp+++s  + +qaklll  ++ dgyrvee   + lvlgWk+
  XP_021660039.1 387 LEAGFPMQSKARALVERVFLGPRIAGSLARIYSTRAD--EEGCCWGDWMGAGGFKPAKISFANHCQAKLLLGLFN-DGYRVEELgFNRLVLGWKS 478
                     *********************************9654..45689*******************************.******99569999***** PP

            GRAS 365 rpLvsvSaWr 374
                     r+L+s+S W+
  XP_021660039.1 479 RRLLSASIWT 488
                     *********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 494 aa     Download sequence    
MAMAIDDVFE LDFSGYSSTT TITTTTVTTT TTSTENDHHT CDWNVCSPIV DWEAFPVNHD  60
DFQDLIESMM EDEGLNQTTS NSNSSTDTIL IDEETSGEDF KGLRLVHLLM AVAEALTGVN  120
KSRDLARVIL VRLKELVSPN DGTNMERLAA YFTDALQGLL EGAGGGPVKH LINNGPYHHH  180
HRDDHHHQAD VLAAFQLLQD MSPYVKFGHF TANQAILEAV AQDRRVHIVD YDIMEGIQWA  240
SLMQSLVARK DGPPTPHLRI TALSRGGNSR RSIGTVQETG RRLVAFAASI GQPFSFHQCR  300
LDSDGSFRPS ALKLVKGEAL VMNCMLHLPH FNYRAPDSIA SFLCGAKTLN PRLVTLVEEE  360
VGPIGDGGFV GRFMDSLHHY SALYDSLEAG FPMQSKARAL VERVFLGPRI AGSLARIYST  420
RADEEGCCWG DWMGAGGFKP AKISFANHCQ AKLLLGLFND GYRVEELGFN RLVLGWKSRR  480
LLSASIWTSP SKSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-167GRAS family protein