PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021659709.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HSF

Protein Properties

Length: 404aa MW: 46404.5 Da PI: 4.6464

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021659709.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.6	2.7e-35	14	105	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye+++d+++++++sws++++sf+v+++ efa+++Lp++Fkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F +g+ +l+++ XP_021659709.1 14 FLSKTYEMVDDPSTDSVVSWSQSNKSFIVWNPPEFARDLLPRFFKHNNFSSFIRQLNTYGFRKIDPEQ---------WEFANEDFIRGQAHLMKN 99 9*************************************************************9998.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_021659709.1 100 IHRRKP 105 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MDESQGSSNS LPPFLSKTYE MVDDPSTDSV VSWSQSNKSF IVWNPPEFAR DLLPRFFKHN 60 NFSSFIRQLN TYGFRKIDPE QWEFANEDFI RGQAHLMKNI HRRKPVHSHS MQNLQGQGSN 120 PLTDPERQTL TDDMERLQRE KEALVAEIQR HEQETQGFEM QMQDLKEKLQ QMERRQQTIV 180 SFVAQVLQKP GLALNLMSQL EPGHDRKRRL PRIHYFHDEA SMEENQMVTC QARENVDSNS 240 FALSSMEQLE QLESSLTFWE SIVNDVQTNI QSNSILELDE STSCAESPAI SCVQFSVDIR 300 PRSPTIDMNS EPAVASVPEP DPLKEQATGT APTVAAGVND VFWEQFLTEN PGSTDTQEVQ 360 SERKDSGDRK NEIKPIDQGK FWWNMRNVNN LAEQMGHLTP AERT

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MDESQGSSNS LPPFLSKTYE MVDDPSTDSV VSWSQSNKSF IVWNPPEFAR DLLPRFFKHN  60
NFSSFIRQLN TYGFRKIDPE QWEFANEDFI RGQAHLMKNI HRRKPVHSHS MQNLQGQGSN  120
PLTDPERQTL TDDMERLQRE KEALVAEIQR HEQETQGFEM QMQDLKEKLQ QMERRQQTIV  180
SFVAQVLQKP GLALNLMSQL EPGHDRKRRL PRIHYFHDEA SMEENQMVTC QARENVDSNS  240
FALSSMEQLE QLESSLTFWE SIVNDVQTNI QSNSILELDE STSCAESPAI SCVQFSVDIR  300
PRSPTIDMNS EPAVASVPEP DPLKEQATGT APTVAAGVND VFWEQFLTEN PGSTDTQEVQ  360
SERKDSGDRK NEIKPIDQGK FWWNMRNVNN LAEQMGHLTP AERT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	210	DRKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	1e-142	HSF family protein