PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021659046.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 446aa MW: 51084.6 Da PI: 6.6329

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021659046.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	82.1	7.6e-26	121	217	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt+++v++Li+a+++++e+ ++++ +kk++W+ vsk+m+ergf++sp+qC++k+++lnkryk+++++ +++ +++++++ +++d XP_021659046.1 121 KWTDKMVRLLITAVSYIGEDTSSDSeggmrrklavlQKKGKWKLVSKVMAERGFHVSPQQCEDKFNDLNKRYKRLNDMLGRGtSCQVVENPALLD 215 7**************9999987668888899999********************************************5699998888877 PP trihelix 84 ql 85 + XP_021659046.1 216 VI 217 65 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MEGNLSQGGM MPGGAPFGGL DLQGSIRLRH QAPYAHTVNQ QQHPGHRQGS SIHPSVHEAF 60 PLTIGTVDNS DQTISMTNYN KGDKGKNPAS DEDERSYTED GADGHNEASR GKKGSAWQRV 120 KWTDKMVRLL ITAVSYIGED TSSDSEGGMR RKLAVLQKKG KWKLVSKVMA ERGFHVSPQQ 180 CEDKFNDLNK RYKRLNDMLG RGTSCQVVEN PALLDVIDYL TDKDKDDVRK ILSSKHLFYE 240 EMCSYHNSNR LHLPHDPALQ RSLQLALRSK DDHDIDDMKR HQQDDLDEDD QEVETEDHDE 300 FEENHTSRGD SRGICAVSGG SVKRLRHGQG HEDACFGHSS QDGNKGSYSH LQIGQVDMNQ 360 MSSESTRAAW SQKQWMESRT IQLEEQKLQI QLETLELEKQ RFKWKRFSRK RDHELEKMRI 420 ENERMKLENE RIALELKRKE NSVDFN

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MEGNLSQGGM MPGGAPFGGL DLQGSIRLRH QAPYAHTVNQ QQHPGHRQGS SIHPSVHEAF  60
PLTIGTVDNS DQTISMTNYN KGDKGKNPAS DEDERSYTED GADGHNEASR GKKGSAWQRV  120
KWTDKMVRLL ITAVSYIGED TSSDSEGGMR RKLAVLQKKG KWKLVSKVMA ERGFHVSPQQ  180
CEDKFNDLNK RYKRLNDMLG RGTSCQVVEN PALLDVIDYL TDKDKDDVRK ILSSKHLFYE  240
EMCSYHNSNR LHLPHDPALQ RSLQLALRSK DDHDIDDMKR HQQDDLDEDD QEVETEDHDE  300
FEENHTSRGD SRGICAVSGG SVKRLRHGQG HEDACFGHSS QDGNKGSYSH LQIGQVDMNQ  360
MSSESTRAAW SQKQWMESRT IQLEEQKLQI QLETLELEKQ RFKWKRFSRK RDHELEKMRI  420
ENERMKLENE RIALELKRKE NSVDFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-153	Trihelix family protein