PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658938.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 649aa MW: 74319.4 Da PI: 7.606

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658938.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.4	1.3e-07	461	502	2	40
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 ++W +eE ell ++ +++++g +W+ I++++g+gR+ +++ XP_021658938.1 461 KPWEKEEIELLRKGMQKYPKGtsrRWEVISEYIGTGRSVEEI 502 68***********************************99876 PP
2	Myb_DNA-binding	29.7	1.5e-09	592	636	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +W+t + lv+a k ++++ +W+++a+ ++ g+t +qck ++ XP_021658938.1 592 AWSTVQERALVQALKTFPKEtsqRWERVAAAVP-GKTVNQCKKKFA 636 8******************************.******9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 649 aa Download sequence
MAVHSGFRLI SYSQELVDGQ PVYVSSNSLP IKALKFEPAG HSFHAVALKL LGCEEEDADG 60 EDQKVSNEKE QAYIPSYDSY SSKGKKKSGT GDKQQDHYAL LGLGHLRYLA TEEQIRKSYR 120 EVALKYHPDK QAALLLAEET EAAKQAKKDE IESHFKSIQE AYEVLIDPLK RRIYDSTDEF 180 DDEIPTDCAL QDFFRVFGPA FMRNGRWSVN QPIPSLGDDN TSLKEVESFY DFWYSFKSWR 240 EFPHADEFDI EQAESREHKR WMERQNAKLT EKARKEEYAR IRTLVDNAYR RDPRILRRKE 300 EEKAEKQRKK EAKILAKKLQ EEEALRAAEE EKRLKEEEER RAAEVALQQK KVKEKEKKLL 360 RKERTRLRTL SATILSQRLL DLGEEDVENL CLSLDIEQLR NICGKMEGKD VLEQAKVLRD 420 ASGSSHDSES NKRDEKKNIQ QNDTGISNGT VPLSSFERKE KPWEKEEIEL LRKGMQKYPK 480 GTSRRWEVIS EYIGTGRSVE EILKATKTVL LQKPDSAKAF DSFLEKRKPA QSIASPLTTR 540 EEIGSAAIKQ GPGSSAMKLD DSEESSSRSA NNKNPDEGFA ENGSSSSSDQ DAWSTVQERA 600 LVQALKTFPK ETSQRWERVA AAVPGKTVNQ CKKKFALLKE SFRNKKNAV

Sequence ? help Back to Top

Protein Sequence Length: 649 aa Download sequence

MAVHSGFRLI SYSQELVDGQ PVYVSSNSLP IKALKFEPAG HSFHAVALKL LGCEEEDADG  60
EDQKVSNEKE QAYIPSYDSY SSKGKKKSGT GDKQQDHYAL LGLGHLRYLA TEEQIRKSYR  120
EVALKYHPDK QAALLLAEET EAAKQAKKDE IESHFKSIQE AYEVLIDPLK RRIYDSTDEF  180
DDEIPTDCAL QDFFRVFGPA FMRNGRWSVN QPIPSLGDDN TSLKEVESFY DFWYSFKSWR  240
EFPHADEFDI EQAESREHKR WMERQNAKLT EKARKEEYAR IRTLVDNAYR RDPRILRRKE  300
EEKAEKQRKK EAKILAKKLQ EEEALRAAEE EKRLKEEEER RAAEVALQQK KVKEKEKKLL  360
RKERTRLRTL SATILSQRLL DLGEEDVENL CLSLDIEQLR NICGKMEGKD VLEQAKVLRD  420
ASGSSHDSES NKRDEKKNIQ QNDTGISNGT VPLSSFERKE KPWEKEEIEL LRKGMQKYPK  480
GTSRRWEVIS EYIGTGRSVE EILKATKTVL LQKPDSAKAF DSFLEKRKPA QSIASPLTTR  540
EEIGSAAIKQ GPGSSAMKLD DSEESSSRSA NNKNPDEGFA ENGSSSSSDQ DAWSTVQERA  600
LVQALKTFPK ETSQRWERVA AAVPGKTVNQ CKKKFALLKE SFRNKKNAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	1e-129	MYB family protein