PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021658785.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 370aa MW: 40284.4 Da PI: 6.3385 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 55.1 | 1.1e-17 | 261 | 295 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C t kTp+WR gp g+ktLCnaCG++y++ +l XP_021658785.1 261 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 295 99*****************************9885 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 370 aa Download sequence |
MEAPEFYGQS GICSQFANEK HHSLDSKPSG GGGGGDHFIV EDLLDFSNED AVVTDGGAFD 60 TVTGNSTDSS TVTVVDSCNS SSFSGCEPCF KGDVGSRNIA DAQFSSDLCV PYDDLAELEW 120 LSNFVEESFS SEDLQQLQLI SGIRARPDES SEIRNFQSHC NVNNTTISNN AAATNNNNNN 180 PIFHPEMSVP AKARSKRSRA APCNWASRLL VLSPTTSSSD PEIVVTPANH PISEKKTVKA 240 PGPKRREGAD GGAGNGDGRK CLHCATDKTP QWRTGPMGPK TLCNACGVRY KSGRLVPEYR 300 PAASPTFVLT KHSNSHRKVL ELRRQKELLR AQQQQQHQFL HHHQSMVFDV SNGDDYLIHQ 360 HVGPDFGQLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G25830.1 | 2e-79 | GATA family protein |