PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658599.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 309aa MW: 34631.7 Da PI: 7.2855

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658599.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	133.6	7.8e-42	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC+++Cv+apyfp +qp kf vh++FGasnv kll++l++ +reda++sl+yeAe r+rdPvyG+vg+i+ lqq+l+ql+++l XP_021658599.1 7 PCAACKFLRRKCTQECVFAPYFPPDQPLKFSSVHRVFGASNVAKLLNELSTAQREDAVNSLAYEAEERLRDPVYGCVGLISILQQRLKQLQNDLY 101 7*********************************************************************************************9 PP DUF260 96 llkee 100 ++k+e XP_021658599.1 102 HAKKE 106 99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MSSSNSPCAA CKFLRRKCTQ ECVFAPYFPP DQPLKFSSVH RVFGASNVAK LLNELSTAQR 60 EDAVNSLAYE AEERLRDPVY GCVGLISILQ QRLKQLQNDL YHAKKELAQY IGPSAMLPIL 120 QPPTFMPQQH LGNPSASNVM PHNMLPMMSI PTGPAHGGQL MIRDHPQQPH QHSTHHQQQQ 180 FFEAQQLAAA MAVRDQQEMF RAYDQQQQQH QQHQNQSQHQ QELVRFNSGF DAAGSVTATG 240 YNQLSSASAM SPSLALGTYD NPFQIQPQAE HHHHQLQAQL LIQPQQPQQT QQQQQRSGSE 300 EGRSVGPSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	2e-83	LBD family protein