PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658542.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NAC

Protein Properties

Length: 262aa MW: 29835.2 Da PI: 7.6509

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658542.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	145.7	2.4e-45	4	137	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lppGfrF Pt+eelv++yL++k+eg++ l ++++i+ +diy+++Pw+Lp+ + + ++w+fF++r++++a+g r++r t++gyWkatg XP_021658542.1 4 LPPGFRFYPTEEELVSFYLHNKLEGRRpdlnLVMDRIIPVLDIYEFNPWQLPQyagdLSNRDPEQWFFFIPRQESEARGGRPKRLTTAGYWKATG 98 79***********************77765566689999*******645532233556*************************** PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 + +v+s +++++g+k+t+vfy+grap+g+ktdW m+ey+ XP_021658542.1 99 SPGHVYS-NNRTIGMKRTMVFYRGRAPNGRKTDWKMNEYK 137 ***.999**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MGDLPPGFRF YPTEEELVSF YLHNKLEGRR PDLNLVMDRI IPVLDIYEFN PWQLPQYAGD 60 LSNRDPEQWF FFIPRQESEA RGGRPKRLTT AGYWKATGSP GHVYSNNRTI GMKRTMVFYR 120 GRAPNGRKTD WKMNEYKAIQ GESSSSSSTA ASATLRHEFS LCRVYKKSKN TRAFDRRPLG 180 VDDIRGHQAA AAIIRGDEAT TSLQNPPMVL ERPNSTESSS SEELATNNPP QTGETSSIPM 240 SIDTQPPSWD WDQLDWYYGG QN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	2e-73	NAC family protein