PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021656827.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | NAC | ||||||||
Protein Properties | Length: 247aa MW: 29416.4 Da PI: 6.1044 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 95.5 | 8.5e-30 | 2 | 127 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 +p GfrF+Ptd+el+ + L +k+++++++l +i +++y++eP+dL+ + +++ +++e y+++kr++ + + +t +g Wkat + k+v+ XP_021656827.1 2 VPHGFRFNPTDQELI-QILDRKASEQEMPL-PFIVYANLYEHEPQDLEwNhSAALGNEERYYYCKRENDS------REVTGRGWWKATSHVKKVH 88 589************.88***********9.88**************9632444588899*****98853......45999************** PP NAM 94 skkgelvglkktLvfy.....kgrapkgektdWvmheyrl 128 + +++lvg k+ L+f+ + +++++ kt+W+mhey+l XP_021656827.1 89 V-NENLVGYKRPLTFHryrdqERNRNNAIKTNWIMHEYSL 127 *.999***********7766545667788*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MVPHGFRFNP TDQELIQILD RKASEQEMPL PFIVYANLYE HEPQDLEWNH SAALGNEERY 60 YYCKRENDSR EVTGRGWWKA TSHVKKVHVN ENLVGYKRPL TFHRYRDQER NRNNAIKTNW 120 IMHEYSLESK ATEWRLCKIK YKGKPSMQEE MENIRQRYSS RNDSEAAGGS MNTQTGSDRE 180 QENPPPAVSS TMPLENGNHQ TYYWNMQQLP QAPYGDPYQT NGYYFNEQQE QLELSEQQFS 240 SLWSWQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52890.1 | 2e-22 | NAC family protein |