PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021656616.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 594aa MW: 65662.8 Da PI: 5.2524

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021656616.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	78.9	5.2e-25	124	225	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+ltpsd+++ g +++p+ +a+++ ++ + t+t++d +g sW++++iyr++++r++lt+GW++Fv+ ++L +gD+vvF+ ++ XP_021656616.1 124 FAKILTPSDANNGGGFSVPRFCADSIfpplnyqADPPVQ--TITVTDIHGISWDFRHIYRGTPRRHLLTTGWSKFVNHKNLIAGDTVVFM--RNL 214 89*******************999995444444..8********************************************..568 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 +e++++v+r+ XP_021656616.1 215 AGEMFIGVRRA 225 9999**996 PP
2	Auxin_resp	82.6	8.9e-28	273	357	1	83
Auxin_resp 1 aahaastksvFevvYnPrast.seFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a+++a+++ +FevvY+Pr + s+Fvv++e ve+al+v +++GmR+km++eted s++++ +Gt+++ d W++S+Wr+L+ XP_021656616.1 273 AIERAAQGLPFEVVYYPRPVWySDFVVRAEVVERALNVFWTAGMRVKMSMETEDLSRTTCfQGTISSAAVPDCGPWRGSPWRMLQ 357 578899**********7655*********************************99********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
MRPLPPSSDL RRLDHRIWRA CAGSSVHIPT VNSRVYYFPQ GHLEQSSSSV SHSLLSPLAR 60 SRPSIPCQIS AVQLLADPVT DEVYTKLLLF PIDPSLNHSL PLLEPSGRLG REGGDDDEDE 120 IVAFAKILTP SDANNGGGFS VPRFCADSIF PPLNYQADPP VQTITVTDIH GISWDFRHIY 180 RGTPRRHLLT TGWSKFVNHK NLIAGDTVVF MRNLAGEMFI GVRRAVRSNN GEDCARWREQ 240 IGCGTGDVKI NVKEEGFSRS GRGRVSHEAV MEAIERAAQG LPFEVVYYPR PVWYSDFVVR 300 AEVVERALNV FWTAGMRVKM SMETEDLSRT TCFQGTISSA AVPDCGPWRG SPWRMLQITW 360 DEPEVLQNAK RVNPWQVEFV APTPPLHDAF PPENRFKFPE NSGLLTDGDG ELFFPMSGPC 420 NSTIGNMNQS LLNFNTSPAG MQGARQDPFS IFGLSSFLSE TASQTCPDNV FDNKMVPKLK 480 TVSTELNIGS SQSDYLSSDS QSSVHSFATE LVGNSRCNST QVGISSFQLF GKIIHINQPV 540 ESGFDDAGYM EDCGSKGYNE NSPLDLALSS SYTELLNRID VQCQRASEVE ACSL

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

MRPLPPSSDL RRLDHRIWRA CAGSSVHIPT VNSRVYYFPQ GHLEQSSSSV SHSLLSPLAR  60
SRPSIPCQIS AVQLLADPVT DEVYTKLLLF PIDPSLNHSL PLLEPSGRLG REGGDDDEDE  120
IVAFAKILTP SDANNGGGFS VPRFCADSIF PPLNYQADPP VQTITVTDIH GISWDFRHIY  180
RGTPRRHLLT TGWSKFVNHK NLIAGDTVVF MRNLAGEMFI GVRRAVRSNN GEDCARWREQ  240
IGCGTGDVKI NVKEEGFSRS GRGRVSHEAV MEAIERAAQG LPFEVVYYPR PVWYSDFVVR  300
AEVVERALNV FWTAGMRVKM SMETEDLSRT TCFQGTISSA AVPDCGPWRG SPWRMLQITW  360
DEPEVLQNAK RVNPWQVEFV APTPPLHDAF PPENRFKFPE NSGLLTDGDG ELFFPMSGPC  420
NSTIGNMNQS LLNFNTSPAG MQGARQDPFS IFGLSSFLSE TASQTCPDNV FDNKMVPKLK  480
TVSTELNIGS SQSDYLSSDS QSSVHSFATE LVGNSRCNST QVGISSFQLF GKIIHINQPV  540
ESGFDDAGYM EDCGSKGYNE NSPLDLALSS SYTELLNRID VQCQRASEVE ACSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77850.1	1e-171	ARF family protein