PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021655938.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NAC

Protein Properties

Length: 567aa MW: 62546.6 Da PI: 4.3535

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021655938.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.8	7.5e-52	10	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yLk+kv++k+ ++ + i+ vdiyk+ePwdLp k k+k+++ ewyfFs dkky +g+++nrat++gyWk+tgkd++v XP_021655938.1 10 LAPGFRFHPTDEELVRYYLKRKVTNKPSRC-DPIAVVDIYKTEPWDLPdKsKLKSRDLEWYFFSMLDKKYGNGSKTNRATEKGYWKTTGKDRPVR 103 579**********************999.89**********95347777888********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++vg+kktLv++ grap+ge+t+Wvmheyrl XP_021655938.1 104 W-NLRTVGMKKTLVYHLGRAPRGERTNWVMHEYRL 137 9.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence
MARGDSAASL APGFRFHPTD EELVRYYLKR KVTNKPSRCD PIAVVDIYKT EPWDLPDKSK 60 LKSRDLEWYF FSMLDKKYGN GSKTNRATEK GYWKTTGKDR PVRWNLRTVG MKKTLVYHLG 120 RAPRGERTNW VMHEYRLADE DLEKAGIVQD AFVLCRIFQK SGTGPKNGEQ YGAPFVEEEW 180 DDDEVVGVLL PGEEMVVADE VVLGDDIYEE TNELDQNFDG GVSSENASLP VNYYHGETSN 240 YVEPSENFSG DDQKPIIDRG EAQHGSDLPD GQSLFSLPGQ YGIDAKSVRH EYITESSNNA 300 NAIDDNFLLD EPFLDAIGNP PFSEGFFLEA NDLSNPVEPD SAGDSTVFDM VDEYLNFFDA 360 SDDNLTFDPS ELIGSESTVS DQASLSEKIR DVNGGTEEVP MATEKLLATH SNTDASSSKQ 420 QKPEATKIDS DIKFPFMKQA SHMLGSIPAP PAFASEFPIK DAALQLNAAQ SSSSIRVTAG 480 VIRIENITFG SSGMDGSFSK NGNVNIILSF GMLQDNASPT PTSLVPLGSL FTGKTLSLVS 540 HSWLSFMCLW VLILSVSFKI GTCICTK

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence

MARGDSAASL APGFRFHPTD EELVRYYLKR KVTNKPSRCD PIAVVDIYKT EPWDLPDKSK  60
LKSRDLEWYF FSMLDKKYGN GSKTNRATEK GYWKTTGKDR PVRWNLRTVG MKKTLVYHLG  120
RAPRGERTNW VMHEYRLADE DLEKAGIVQD AFVLCRIFQK SGTGPKNGEQ YGAPFVEEEW  180
DDDEVVGVLL PGEEMVVADE VVLGDDIYEE TNELDQNFDG GVSSENASLP VNYYHGETSN  240
YVEPSENFSG DDQKPIIDRG EAQHGSDLPD GQSLFSLPGQ YGIDAKSVRH EYITESSNNA  300
NAIDDNFLLD EPFLDAIGNP PFSEGFFLEA NDLSNPVEPD SAGDSTVFDM VDEYLNFFDA  360
SDDNLTFDPS ELIGSESTVS DQASLSEKIR DVNGGTEEVP MATEKLLATH SNTDASSSKQ  420
QKPEATKIDS DIKFPFMKQA SHMLGSIPAP PAFASEFPIK DAALQLNAAQ SSSSIRVTAG  480
VIRIENITFG SSGMDGSFSK NGNVNIILSF GMLQDNASPT PTSLVPLGSL FTGKTLSLVS  540
HSWLSFMCLW VLILSVSFKI GTCICTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-166	NAC family protein