PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021655488.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 361aa MW: 40887.5 Da PI: 5.9472

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021655488.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50	6.9e-16	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++ Ed++lv ++++G ++W++ ++ g+ R++k+c++rw +yl XP_021655488.1 16 KGPWSPAEDLRLVTFIQKHGHENWRALPKQAGLLRCGKSCRLRWINYL 63 79****************************99**********97 PP
2	Myb_DNA-binding	53.8	4.4e-17	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +++ ++ lG++ W++Ia++++ gRt++++k+ w+++l XP_021655488.1 69 RGNFTKEEEDTIIKMHQTLGNK-WSKIASHLP-GRTDNEIKNVWNTHL 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MGKGRAPCCD KSQVKKGPWS PAEDLRLVTF IQKHGHENWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDVKRG NFTKEEEDTI IKMHQTLGNK WSKIASHLPG RTDNEIKNVW NTHLKKRLPF 120 NKEPADSNGE ESKESSSTSS SSSYSSSSTI ISSGKRNMAI IELDHQWKHS SMTKRPRVLD 180 DLQELRPINK EAKELSSSSS SSHNSNVTIN SSQVDVSKPD DDQMGSLFNF SGPNYDVPLK 240 EVNKPEIQDI AAIEIPFESD LDFWNMLDGL NSLQTNEEVQ LRNVETGHSS SLGVEYVNGQ 300 AENRKWLQYL ENELGLETTR DGNHQNLSDD AAEPLLEPEN EIPIEPEVNS WMGFHHLWPS 360 L

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MGKGRAPCCD KSQVKKGPWS PAEDLRLVTF IQKHGHENWR ALPKQAGLLR CGKSCRLRWI  60
NYLRPDVKRG NFTKEEEDTI IKMHQTLGNK WSKIASHLPG RTDNEIKNVW NTHLKKRLPF  120
NKEPADSNGE ESKESSSTSS SSSYSSSSTI ISSGKRNMAI IELDHQWKHS SMTKRPRVLD  180
DLQELRPINK EAKELSSSSS SSHNSNVTIN SSQVDVSKPD DDQMGSLFNF SGPNYDVPLK  240
EVNKPEIQDI AAIEIPFESD LDFWNMLDGL NSLQTNEEVQ LRNVETGHSS SLGVEYVNGQ  300
AENRKWLQYL ENELGLETTR DGNHQNLSDD AAEPLLEPEN EIPIEPEVNS WMGFHHLWPS  360
L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56160.1	2e-74	MYB family protein