PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021654056.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 446aa MW: 51152.8 Da PI: 6.4442

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021654056.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	81.1	1.6e-25	121	217	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt+++v++Li+a+++++e+ +++ +kk++W+++sk+m+erg ++sp+qC++k+++lnkrykk++++ +++ +++++++ +++d XP_021654056.1 121 KWTDKMVRLLITAVSYIGEDATSDSgggirrkfavlQKKGKWKSISKVMAERGHHVSPQQCEDKFNDLNKRYKKLNDMLGRGtSCQVVENPALLD 215 7****************99998778888899999********************************************5699998888877 PP trihelix 84 ql 85 + XP_021654056.1 216 VI 217 65 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MEGNLSQGSM IPGGTPFGGL DLQGSMRVHQ QAQHQHSIHH QPHPLHRQGS SVHPSIHEGF 60 PLTVGTMHNS DQTISMTDYN KGDKGKNSAS DEDEPSYTED GADGQNDTSR GKKGSPWQRV 120 KWTDKMVRLL ITAVSYIGED ATSDSGGGIR RKFAVLQKKG KWKSISKVMA ERGHHVSPQQ 180 CEDKFNDLNK RYKKLNDMLG RGTSCQVVEN PALLDVIDYL TEKEKEDVRK ILSSKHLFYE 240 EMCSYHNGNR LHLPHDPTLQ RSLQLALRNK DDHDSDDVRK HQHDDLDEDD QEVETDDHDE 300 LEESQPPHGD SRGMHGVLGV SMKRLRQGQG LEDACFGNSS QDGGKGSYSH LQNAQVDINQ 360 VSSESTRAAW LQKQWMESRM VQLEEQKLQI QHESLELEKE RFKWQRFSWK RDRELEKLRM 420 ENERMKLENE RMVLELKRKE MGIDFN

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MEGNLSQGSM IPGGTPFGGL DLQGSMRVHQ QAQHQHSIHH QPHPLHRQGS SVHPSIHEGF  60
PLTVGTMHNS DQTISMTDYN KGDKGKNSAS DEDEPSYTED GADGQNDTSR GKKGSPWQRV  120
KWTDKMVRLL ITAVSYIGED ATSDSGGGIR RKFAVLQKKG KWKSISKVMA ERGHHVSPQQ  180
CEDKFNDLNK RYKKLNDMLG RGTSCQVVEN PALLDVIDYL TEKEKEDVRK ILSSKHLFYE  240
EMCSYHNGNR LHLPHDPTLQ RSLQLALRNK DDHDSDDVRK HQHDDLDEDD QEVETDDHDE  300
LEESQPPHGD SRGMHGVLGV SMKRLRQGQG LEDACFGNSS QDGGKGSYSH LQNAQVDINQ  360
VSSESTRAAW LQKQWMESRM VQLEEQKLQI QHESLELEKE RFKWQRFSWK RDRELEKLRM  420
ENERMKLENE RMVLELKRKE MGIDFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-176	Trihelix family protein