PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653832.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 721aa MW: 79906.3 Da PI: 9.6574

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653832.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.6e-07	620	669	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ XP_021653832.1 620 RRPFSVTEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 669 678999******************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 721 aa Download sequence
MVLQKRLDYG FNGYQVPPTP RATRSARRRG SFKKKIGENQ MCAFDLLAIV AGNLLLEKES 60 TPSSSDASAG KDHCMVVNNT VKNEWQDEQK NMKVEAHDQG SAARSFFVSG LVSQDNDQNH 120 CSKGSLYAQN DHNLELASTE VTSECAKRFD SEELVNRKSK NEIRTFASKV EGGSSGYREF 180 NDCKLEGESK NLINDGSCKS GKMQNGTVAN TCSFEDPVVW DGKPHALVSS DSSAKVPLCG 240 NNISHSSYPT NGDNLNVDSR DDDENSSGCT HPRTTKKFFR PAPRIGDRRI RKILASKYWK 300 VAPRLKDVTL SNTDGADSKS LYLKRKYYYK YQRSERLYPF KKRKHFAYAS QSNSEGGISN 360 EFICNSPQKG NDGDASASGR KKHGGFFFLH SALILGFMAI YNLLLIILIS CAVIGASSSV 420 AGQHNSFRPR DSHVKLRIKS FKVPELFIEI PESATVGLLK RTVMEAVTAI LGGGLRVGVL 480 LQGKKVRDDN KTLLQTGICH NIQLDALGFS LEPNSSRTPP SLSPGDSPFL VDTPQPVSRY 540 PPAPSLVQQI ACAASPEPHG TNLGNLIESD HDSAPSPTDI DKSTDSKALV PVPEMNIEAL 600 AVVPAHRKSK RSEIVQRRIR RPFSVTEVEA LVQAVEKLGT GRWRDVKLRA FDNAKHRTYV 660 DLKDKWKTLV HTARISPQQR RGEPVPQELL DRVLTAHAFW SQQQAKQQHK QQQQPETCLL 720 L

Sequence ? help Back to Top

Protein Sequence Length: 721 aa Download sequence

MVLQKRLDYG FNGYQVPPTP RATRSARRRG SFKKKIGENQ MCAFDLLAIV AGNLLLEKES  60
TPSSSDASAG KDHCMVVNNT VKNEWQDEQK NMKVEAHDQG SAARSFFVSG LVSQDNDQNH  120
CSKGSLYAQN DHNLELASTE VTSECAKRFD SEELVNRKSK NEIRTFASKV EGGSSGYREF  180
NDCKLEGESK NLINDGSCKS GKMQNGTVAN TCSFEDPVVW DGKPHALVSS DSSAKVPLCG  240
NNISHSSYPT NGDNLNVDSR DDDENSSGCT HPRTTKKFFR PAPRIGDRRI RKILASKYWK  300
VAPRLKDVTL SNTDGADSKS LYLKRKYYYK YQRSERLYPF KKRKHFAYAS QSNSEGGISN  360
EFICNSPQKG NDGDASASGR KKHGGFFFLH SALILGFMAI YNLLLIILIS CAVIGASSSV  420
AGQHNSFRPR DSHVKLRIKS FKVPELFIEI PESATVGLLK RTVMEAVTAI LGGGLRVGVL  480
LQGKKVRDDN KTLLQTGICH NIQLDALGFS LEPNSSRTPP SLSPGDSPFL VDTPQPVSRY  540
PPAPSLVQQI ACAASPEPHG TNLGNLIESD HDSAPSPTDI DKSTDSKALV PVPEMNIEAL  600
AVVPAHRKSK RSEIVQRRIR RPFSVTEVEA LVQAVEKLGT GRWRDVKLRA FDNAKHRTYV  660
DLKDKWKTLV HTARISPQQR RGEPVPQELL DRVLTAHAFW SQQQAKQQHK QQQQPETCLL  720
L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	324	344	KRKYYYKYQRSERLYPFKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-141	MYB_related family protein