PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653508.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 331aa MW: 36566.8 Da PI: 8.682

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653508.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.6	1.4e-29	174	233	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rs ed++v++ tYegeHnh+ XP_021653508.1 174 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCPVKKKVQRSIEDQSVLVATYEGEHNHP 233 58*************************99**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MKTTSTSAAM DYSSSWVDTS LDLNINPRRS NDDDVPVQAR VGLAKEGQSN FMELGRKVSV 60 KDETGALVEE LNRVSAENKK LTEMLSVMCE NYNALRSQLM DFMSKNQDKE LSPSRKRKSE 120 SSNNNNDNTI AMNGISESSS TDEESCKKSR EEVIKAKISR AYVRTEANDT SLVVKDGYQW 180 RKYGQKVTRD NPSPRAYFKC SFAPSCPVKK KVQRSIEDQS VLVATYEGEH NHPHPSQMEA 240 TSAATRSLTI GSVPCSASLG SSGPTITLDL TKSSKSNNDA RSSKSRMEAP EARQFLVEQM 300 ASSLTKDPNF TAALAAAISG RMLQQNNTEK W

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	114	119	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80840.1	1e-112	WRKY family protein