PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021653479.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family TCP
Protein Properties Length: 391aa    MW: 44294.4 Da    PI: 8.458
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021653479.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP130.91.2e-401222783135
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssaseceaesssssasn 84 
                      k+drhski T++g+RdRR+Rls+++a++fFdLqd+L fdk+skt+eWLl qa paik+l +              s+ss sec   + +s  + 
  XP_021653479.1 122 SKRDRHSKINTAQGPRDRRMRLSLKVAREFFDLQDKLRFDKASKTVEWLLIQARPAIKKLFSGlpqfnysssvgtkSASSTSEC---EVVSGIDD 213
                     69***********************************************************999*9999999965544444555...33333332 PP

             TCP  85 sssg..............kaaksaakskksqksaasalnlakesrakarararertrekmriknk 135
                     + ++              +++ +++ +k +++++a++  la+esr+karararertrek+ +++ 
  XP_021653479.1 214 EAAAikattkisnaktssSSCVNNKGKKAKPSRKAAFDPLARESREKARARARERTREKQWNRKI 278
                     222233444555666666888888867777777777999999*****************999865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MFPSSNNGND PIYYSDQQGY NRPSFNDITS NSKHEDPLFS CFYPPFPFPP YDQLELQDHD  60
VLLHQNHDLL LHHQPLFRAF ASNTSTAASV ETILDMVDSN KNDANNKSRS ASSDQIPRKR  120
SSKRDRHSKI NTAQGPRDRR MRLSLKVARE FFDLQDKLRF DKASKTVEWL LIQARPAIKK  180
LFSGLPQFNY SSSVGTKSAS STSECEVVSG IDDEAAAIKA TTKISNAKTS SSSCVNNKGK  240
KAKPSRKAAF DPLARESREK ARARARERTR EKQWNRKIDK SKLCEEAKNL ELNQLNCLSP  300
FEIGEESGTQ SHTMNPNSLE MLAHEVEVPS SHEQDRLVTT ESMIDDSLLI MGKWSPYSSI  360
INHLYNTAMP QEHQITDLQS FFKSLEAPYN S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.13e-19TCP family protein