PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653168.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 501aa MW: 56089.4 Da PI: 9.7005

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653168.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	149.4	2.4e-46	109	265	2	133
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............ssssaseceaesssss 81 +gkkdrhskihT++g+RdRR+Rls+++a++fFdLqd+LGfdk+skti+WL++++k+aikelt++ s +++s+s+ XP_021653168.1 109 TGKKDRHSKIHTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIDWLFTKSKAAIKELTDSlprprvkrtssggsqS-------LSATSESE 196 79************************************************************9988887654433221.......22222222 PP TCP 82 asnsssg..................kaaksaakskksqksaasalnlakesrakarararertrekmrik 133 + +ss++ + +k++k++++ + + la+esr karararert+ek++i+ XP_021653168.1 197 DMSSSIKltpdngdkremvaeddsfVS-IPRQKRSKKSNKLSLINPLARESRDKARARARERTKEKQKIQ 265 222223355566667888886543211.122244444444445567777****************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MYSPNSSFNP FQCTQNQIII TSSTQEDHSS SFLHFPSHFL DQGDLLLSDF SSHHHHQQQP 60 ILVSNTNLDA ETIQEMNPAA SSKKATRSNN KKNRSNMNGT KQPIPRKRTG KKDRHSKIHT 120 AQGPRDRRMR LSLQIARKFF DLQDMLGFDK ASKTIDWLFT KSKAAIKELT DSLPRPRVKR 180 TSSGGSQSLS ATSESEDMSS SIKLTPDNGD KREMVAEDDS FVSIPRQKRS KKSNKLSLIN 240 PLARESRDKA RARARERTKE KQKIQGLEKS KHYSQANPNN LEQLGPASSL ENGENLGFGS 300 QEMKSPSKMA GEEDQEEPGT YLLQHQMNSV SIIDKFLGLT SAPKSSLIFD LSHNVVVPSG 360 SGADFEDEFS GFPGNWDISD ARVQNRRCAM PSMKLSRGNV NVQNPNAIFM ATPIAQEYKP 420 SSNFITISNA QEQNLNSLFI PPLNTHEENP SSLFINFSNS NERNPSPTPM TPMDTEGLHS 480 RFRQDQHSCN PNAANNYSSL Y

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MYSPNSSFNP FQCTQNQIII TSSTQEDHSS SFLHFPSHFL DQGDLLLSDF SSHHHHQQQP  60
ILVSNTNLDA ETIQEMNPAA SSKKATRSNN KKNRSNMNGT KQPIPRKRTG KKDRHSKIHT  120
AQGPRDRRMR LSLQIARKFF DLQDMLGFDK ASKTIDWLFT KSKAAIKELT DSLPRPRVKR  180
TSSGGSQSLS ATSESEDMSS SIKLTPDNGD KREMVAEDDS FVSIPRQKRS KKSNKLSLIN  240
PLARESRDKA RARARERTKE KQKIQGLEKS KHYSQANPNN LEQLGPASSL ENGENLGFGS  300
QEMKSPSKMA GEEDQEEPGT YLLQHQMNSV SIIDKFLGLT SAPKSSLIFD LSHNVVVPSG  360
SGADFEDEFS GFPGNWDISD ARVQNRRCAM PSMKLSRGNV NVQNPNAIFM ATPIAQEYKP  420
SSNFITISNA QEQNLNSLFI PPLNTHEENP SSLFINFSNS NERNPSPTPM TPMDTEGLHS  480
RFRQDQHSCN PNAANNYSSL Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	8e-31	TCP family protein