PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021653119.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | ARF | ||||||||
Protein Properties | Length: 1128aa MW: 126106 Da PI: 6.5117 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 69.5 | 4.6e-22 | 126 | 226 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ +++++ +l+ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F + +++ XP_021653119.1 126 FCKTLTASDTSTHGGFSVPRRAAEKIfppldySMQPPA-LELVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIR--DEK 217 99*****************************9545444.48************************************************4..466 PP E..EEEEE- CS B3 90 felvvkvfr 98 +l+++++ XP_021653119.1 218 SQLLLGIRH 226 667888875 PP | |||||||
2 | Auxin_resp | 125 | 5e-41 | 252 | 334 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+v+YnPras+seFv++++k++ka++++vs+GmRf+m+feteds rr++Gt++g+sdldp+rW++S+Wr+L+ XP_021653119.1 252 AAHAAANNSPFTVFYNPRASPSEFVIPFAKYNKAMYTQVSLGMRFRMMFETEDSGVRRYMGTITGISDLDPLRWKKSQWRNLQ 334 79*******************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1128 aa Download sequence |
MKVPPNGFMA NSAEGERKNI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE 60 TDFIPNYPNL PSKLICMLHN VTLHADVETD EVYAQMTLQP VNKYDKEALL ASEMGLKQSR 120 QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDYSMQ PPALELVAKD LHDNTWTFRH 180 IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKSQL LLGIRHANKQ QPALSSSVIS 240 SDSMHIGILA AAAHAAANNS PFTVFYNPRA SPSEFVIPFA KYNKAMYTQV SLGMRFRMMF 300 ETEDSGVRRY MGTITGISDL DPLRWKKSQW RNLQVGWDES TAGERPSRVG IWEIEPVVTP 360 FYICPPPFFR PKFPKQPGML DDESDIENAF KRAMPWLGDD FGMKDTPSSI FPGLSLVQWM 420 SMQQNNQFPA TQAGYFPSML PSNALHNNVS TDDPSKLLNF QAPGLSVPSI QFNKANPQNQ 480 VGQLPQPSTT WTQQQQLQQL LQANISQQQP AQPQQLQQQP HPQQQQQRQQ PQPPQQQQLS 540 QQQQQPQPQP QPQPQPRQIR QQPPQLQQQQ QQHIFQPLVN NGSVTPSQIS NQNLQQQMVY 600 SQVQQQQQLL ASNTQSQNIP PANKSSYQLT SLPQDTPFQQ QMEQQSSLLQ RHQQQTQLQQ 660 SPLQLLQQNL SQRTQPQPPP QPQGQQLSQP SLSEQQLQLQ LLQKLQQQQQ QQQLLSPTSS 720 PLQPQLLQQQ QNQQQNHQQN QHFQQSPLSQ SQPLSSNSFS TAALMQSQSF PVYHSRVLQK 780 SPTTIRAHST LTDGDAPSCS TSPSTENCQI SPSNFLNRNQ ESPAVLLGDP VIEPATNLVQ 840 ELNSKSDIQV KHEFPSSKGL DQLKYKGAMT DQLEISSSGT SYCLDAGNSQ QNFSLPTFGL 900 DGDVQSHPRN SLPFATNIDS LAPDTLLSRG YDSQKDLQNL LTNYGGTPRD VETELSTAAI 960 SSQSFGVPNI PFKPGCSNDV AINDSGVLNG GLWANQTQRM RTYTKVQKRG SVGRSIDVTR 1020 YKGYGELRHD LARMFGIEGQ LEDPQSSDWK LVYVDHENDI LLVGDDPWEE FVSCVQSIKI 1080 LSSAEVQQMS LDGDLGSLPV PNQACSGTDS GNAWRGHYDD NSAASFNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19220.1 | 0.0 | ARF family protein |