PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021651737.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 398aa MW: 42795.1 Da PI: 7.9818

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021651737.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	132.4	4.3e-41	83	235	2	115
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s + XP_021651737.1 83 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPsqlrsas 177 689******************************************************************99987777777777555555565566 PP TCP 89 ..............................kaaksaa.kskksqksaasalnlakesr 115 ++++ +a + k++ +++s l+l+ e+ XP_021651737.1 178 fspnfsmqqrrglfpgigletsptptflnfQSSNLNAvLQAKQELRDSSSLELSTETE 235 6667777777777777777666666666653333333355555555555555555444 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MEGGDDQLHH HHHLHHHHHR PNFPFQLLEK KEDEPCPSSS PYPSSLPISS AEPNNNNNNN 60 TNSSLNRSAS SLQIVPEPSK KTPPKRTSTK DRHTKVDGRG RRIRMPALCA ARVFQLTREL 120 GHKSDGETIE WLLQQAEPAV IAATGTGTIP ANFTSLNISL RSSGSSMSVP SQLRSASFSP 180 NFSMQQRRGL FPGIGLETSP TPTFLNFQSS NLNAVLQAKQ ELRDSSSLEL STETEESLSR 240 KRRPEQDLSS QQHQMGSYLL QSSTGAIPAS HSQIPANFWM LANPSNQVMS GDPIWTFPTV 300 NNSALYRGTT SSGLHFMNFP APVALLPSQQ LGSSSISGGG GGSGGNSGIS EGHLNMLAGL 360 NPYRSTGVSE SQASGSHSHH GGGGGNGDDR HDTTSHHS

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MEGGDDQLHH HHHLHHHHHR PNFPFQLLEK KEDEPCPSSS PYPSSLPISS AEPNNNNNNN  60
TNSSLNRSAS SLQIVPEPSK KTPPKRTSTK DRHTKVDGRG RRIRMPALCA ARVFQLTREL  120
GHKSDGETIE WLLQQAEPAV IAATGTGTIP ANFTSLNISL RSSGSSMSVP SQLRSASFSP  180
NFSMQQRRGL FPGIGLETSP TPTFLNFQSS NLNAVLQAKQ ELRDSSSLEL STETEESLSR  240
KRRPEQDLSS QQHQMGSYLL QSSTGAIPAS HSQIPANFWM LANPSNQVMS GDPIWTFPTV  300
NNSALYRGTT SSGLHFMNFP APVALLPSQQ LGSSSISGGG GGSGGNSGIS EGHLNMLAGL  360
NPYRSTGVSE SQASGSHSHH GGGGGNGDDR HDTTSHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	8e-55	TCP family protein