PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021649575.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 428aa MW: 47800.1 Da PI: 8.6617

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021649575.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.4e-12	359	403	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L++l+P+ K + a++L +Av+YIk+Lq XP_021649575.1 359 SIAERVRRTRISERMRKLQDLVPNM-----DKTNTADMLDLAVDYIKDLQ 403 689*******************6.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MESDLQHHHH FLHDHQQHQQ HHQKQMNSGL TRYQSAPGSY FCGFLDRELC EELLNRPTSP 60 ETERIFARFL ANSGGKTENM SNQNFGVIKQ DSPVREAVAQ VNQQAQLMAS VNNNDARLHQ 120 QQHQQQLLRQ QSNYSSSSRS FYQNQSRPPL PDKNSGSGVD YRMVGMERLP QMKSTTRGSN 180 SSLVRHCSSP AGLFSNINVE MDNGYAVLRG MGDFGAGNRE TSYSAASRPP PHSSGRMSPI 240 AEIGNKNIGK NSPENSGFGE TRSNNYVTGF PIGSWDDTSA MSPGAGVKTL TDDDRTLSGL 300 NAFETLSGDS RNHPPMLAHH LSLPKTSAEI SAIEKFLQLH DSVPCKIRAK RGCATHPRSI 360 AERVRRTRIS ERMRKLQDLV PNMDKTNTAD MLDLAVDYIK DLQRQVETLS DIREKCTCTS 420 KQQQQPPP

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MESDLQHHHH FLHDHQQHQQ HHQKQMNSGL TRYQSAPGSY FCGFLDRELC EELLNRPTSP  60
ETERIFARFL ANSGGKTENM SNQNFGVIKQ DSPVREAVAQ VNQQAQLMAS VNNNDARLHQ  120
QQHQQQLLRQ QSNYSSSSRS FYQNQSRPPL PDKNSGSGVD YRMVGMERLP QMKSTTRGSN  180
SSLVRHCSSP AGLFSNINVE MDNGYAVLRG MGDFGAGNRE TSYSAASRPP PHSSGRMSPI  240
AEIGNKNIGK NSPENSGFGE TRSNNYVTGF PIGSWDDTSA MSPGAGVKTL TDDDRTLSGL  300
NAFETLSGDS RNHPPMLAHH LSLPKTSAEI SAIEKFLQLH DSVPCKIRAK RGCATHPRSI  360
AERVRRTRIS ERMRKLQDLV PNMDKTNTAD MLDLAVDYIK DLQRQVETLS DIREKCTCTS  420
KQQQQPPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51140.1	3e-73	bHLH family protein