PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021649061.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 428aa    MW: 46823.8 Da    PI: 7.2157
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021649061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH261.6e-08105126426
                     ---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                     + C+++ + G C+yGd+C++ H+
  XP_021649061.1 105 KVCNYWVQ-GKCSYGDKCRYLHS 126
                     68******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    
MDLDAQGGNS RVFQRLRAQP SNDNRQQKVC HHWRAGRCSR YLCPYLHREL PPPPPAGSNG  60
NASKRGFSDD SGFSGPSGTR RSGNFNNASS WGRLGNNKIL RKTEKVCNYW VQGKCSYGDK  120
CRYLHSWSLG DSFSFLTQLD GHQKVVTGIA LPTGSDKLYT GSNDETVRVW DCQSGQCMGV  180
IQLGGEVGCM ISEGPWIFVG VPNVVKAWNT QTNTDLSLTG PVGQVYALVV GNEFLFAGTQ  240
DGAILAWKFN AVTFNFEPAA SLTGHTVAVV SLVVGADRLY SGSMDHSVRV WNLETLQCVQ  300
TLTEHSSVVM SVLCWDQFLL SCSLDQTIKV WAATESGNLE VAYTHNEEHG LLTLCGMHDL  360
EGKPVLLCSC NDNSVRLFDL PSFSERGKIY AKQEIRSIQT GPGGLFFTGD GTGQVRVWKF  420
VAEPTVSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51980.10.0C3H family protein