PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021648872.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 345aa MW: 38672.9 Da PI: 8.4506

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021648872.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.4	5.8e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++++G+g +W + ++++g++R++k+c++rw++yl XP_021648872.1 14 KGPWSPEEDAKLKAYIEKHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.4	5.9e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_021648872.1 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE KHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGK 120 QRKEQLGRRG SGLKQGRKRV NANPMFSVDH NNNQNPHWPE LPLLDPIPYS IQEPRFNDHA 180 SIRKLLVKLG GRFSDDDQLI RNTATNSHQI PYDISYTPQL HDQPINVSSS ASVDALNDTA 240 LQFPQALYNI DGGGLQMMQG QSNLPVGIEE MGYNNNPQRL DGLEFLLGED MLNYIIGTTS 300 GENIVGSSGE MSSLVYPPMA SNCEEIQQRL LQECALEKLR YPAAL

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE KHGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGK  120
QRKEQLGRRG SGLKQGRKRV NANPMFSVDH NNNQNPHWPE LPLLDPIPYS IQEPRFNDHA  180
SIRKLLVKLG GRFSDDDQLI RNTATNSHQI PYDISYTPQL HDQPINVSSS ASVDALNDTA  240
LQFPQALYNI DGGGLQMMQG QSNLPVGIEE MGYNNNPQRL DGLEFLLGED MLNYIIGTTS  300
GENIVGSSGE MSSLVYPPMA SNCEEIQQRL LQECALEKLR YPAAL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	128	139	RRGSGLKQGRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	8e-77	MYB family protein